Gene AFE_3103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_3103 
Symbol 
ID7135171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand+ 
Start bp2789156 
End bp2789824 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content63% 
IMG OID643531454 
Productphosphoribosyl transferase domain protein 
Protein accessionYP_002427465 
Protein GI218665526 
COG category[R] General function prediction only 
COG ID[COG1926] Predicted phosphoribosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.331363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTACTT ATCCCCCGCA TTATGCCAGC CGCGAAGCGG CTGCAGAATT ACTGGCGCAC 
AGCCTGGCCG CTTATGATGG CAAAGATCCC CTGGTGCTCG CCATTCCCCG CGGGGCACTG 
CCCATGGGGC GCATCATCGC CAACGCGCTG CATGGTGATC TCGACGTGGT GCTGGTACGC 
AAAATCGGGG CGCCCGGCAA TCCCGAATAT GCCGTAGGCG CCGTCGATGA AAGCGGGCGG 
ATATGGATGG ATCCCATTGC CGGCCGTCTG GGCATCGGCG AGCAGTACAT TCGCGACGAA 
GCCGCGCGGC AACTGGAGGT GATCAAGGCG AGACGGGCGC AATACACGCC GATTCACCCG 
GCCATCGATC CCCGTGGCCG GGTCGTCATT GTGGTGGACG ACGGCGTCGC CACCGGCGCT 
ACTCTGGGAG CTGCACTGCG TCTCCTTCGC CAGCAGCGGC CCGCGCGTCT GATCGCCGCC 
TTTGCCGTGG CCCCTCCCGA CACCATCGCA CGCTTGCACC CCCTCGCAGA TGATCTGGTT 
TACCTGTCGG CCCCGGAGCC ATTTCATGCG GTAGGAGAGT TCTTTACGGA TTTCCGGGAA 
GTCAAGGACG AAGAGGTGCT GGAGATCTTG CGCAAAACAC CGTCGTCACG AAAACCGCCG 
CATCCGTAA
 
Protein sequence
MTTYPPHYAS REAAAELLAH SLAAYDGKDP LVLAIPRGAL PMGRIIANAL HGDLDVVLVR 
KIGAPGNPEY AVGAVDESGR IWMDPIAGRL GIGEQYIRDE AARQLEVIKA RRAQYTPIHP 
AIDPRGRVVI VVDDGVATGA TLGAALRLLR QQRPARLIAA FAVAPPDTIA RLHPLADDLV 
YLSAPEPFHA VGEFFTDFRE VKDEEVLEIL RKTPSSRKPP HP