Gene AFE_3100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_3100 
Symbol 
ID7134680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand- 
Start bp2785234 
End bp2785641 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content63% 
IMG OID643531451 
Productcompetence protein ComEA helix-hairpin-helix repeat protein 
Protein accessionYP_002427462 
Protein GI218665419 
COG category[L] Replication, recombination and repair 
COG ID[COG1555] DNA uptake protein and related DNA-binding proteins 
TIGRFAM ID[TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01259] comEA protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATGA AACTGCAGGG CATTTTGTGC GTGCTATTTC TGTTGTTCGC CCCCGCCGTC 
TGGGCGTCGG TGAATATCAA TACCGCGGAC GCGACGGCGC TGGATGCGCT GCCGGGCATC 
GGTCCGGCCA AGGCCCAGGC GGTGCTGGAA TACCGGCAGG CGCACGGGCC TTTCCGGAGC 
GTGGATGAAC TCACCAGTGT TCACGGTATC GGTCCCAGGC TCCTGGAGCG GTTGCGCCCG 
GTGCTCAGTC TCGATGGTGC CACGACCCTG CCACAAACCG CAGCCAGACG CCCAGGGCAT 
TCCCATACCG CCGTGCCGAC CGGCGAGGAG CGCGTTGTCC GACACGGTAG TCACGGGTAT 
ATCCTGGAAA GTGGTCCGCA GACGAACGCT TTCTCGCTGA AGGACTAA
 
Protein sequence
MEMKLQGILC VLFLLFAPAV WASVNINTAD ATALDALPGI GPAKAQAVLE YRQAHGPFRS 
VDELTSVHGI GPRLLERLRP VLSLDGATTL PQTAARRPGH SHTAVPTGEE RVVRHGSHGY 
ILESGPQTNA FSLKD