Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_3094 |
Symbol | polI |
ID | 7135278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 2779237 |
End bp | 2781936 |
Gene Length | 2700 bp |
Protein Length | 899 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643531445 |
Product | DNA polymerase I |
Protein accession | YP_002427456 |
Protein GI | 218665686 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
TIGRFAM ID | [TIGR00593] DNA polymerase I |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCCCAAG ATCCCCGTAT CCTCGTCGAT GCCTCCAGTT TCCTCTATCG TGCCTTTCAC GCGCTGCCTG ACTTGCGCGC CCCGGACAAT CTTCCGACCG GAGCCATTTA CGGCGTCGCC AACATGCTCC GCCGCCTGCT GAAGGAGCAT CCGAGTGACG AAATCATCGT CATATTCGAC GCCCCCGGCG GGACATTTCG GGACAGACTT TATCCTGAGT ATAAGGCACA CCGGCCGGCC ATGCCGGAGG AGCTACGAGT CCAGGTTCCG CTGCTGCACG ACTGGATCAG GGCCACCGGC CTGCCGCTCG TGATCGAGCC CGATGTGGAG GCGGATGACG TGATCGGCAC CCTGGCCCGG GAGGCGGCGC CCGACCAGCA GGTGCTTATC GTCACCGGCG ACAAGGACAT GGCCCAATTG GTGAACTCGC GGGTGCGGCT TATCGATACC ATGAAAGGTA TCGAAACGGA TGCGGCCGGG GTTGAGGAGC GCTTTGGTGT ACCGCCGGAG CGTATTGCCG ACCTGCTGGC GTTGATCGGC GACAAGGTGG ACAACATTCC CGGCGTGCCC GGGGTCGGAC CGAAAACGGC TGCCCGGTGG CTGACGCAAT ATGGCGATCT GGACGGTGTG CTGGCCCACG CCGGCGATAT CGGCGGCAAG GTGGGTGAGG CGCTGCGTGC CTCCGCACAT TATCTGCCTT TGAGCCGCGA TCTGGCGACC ATTCGCTGTG ATCTGACGCT GCCTGTCGCG ACGTACGCCC GCCGGGCGGC GGATGTGGTC GCCTTGCGGG CGTTGGCGCA GCGCCTGGGT TTTCAGGCCT GGCTCAGGGA CCTGCCTGCG GGCGATGCGG GGAAAGTGCC GGAAAAGCGG AGCAGTGATA TAGATCGCGC CGCCTACCGG GCCATCACCA CTGCGGAAGC GCTGGATGTG CTGCTGCTTG CCCTGAAAGC GGCCGATGTG GTCGCTTTGG ATACGGAAAC CACGAGCCTC GATCCGCTGC ATGCCGATCT GGTGGGAATT TCCTGTGCCT GGCAGGCCGG TGGCGACTAT CAGGCTGTCT ACGTTCCCGT TGGCCACCGC GACGCTGGTC CGCAACTGGA TCGACAGACA GTCCTCACCG CCTTGCGCCC GTGGTTGGAA GACCCGCAGG CCGCCAAGCT GGCCCAGAAC GCTAAATACG ATTGGCGGGT TTTCTGGCGA CATGGCATCC ACCCCGCCGG CCTGGCCCGC GACACGTTGC TGGAAAGCTA CGTCTTAAAC AGCAGTCACA ATGGTCACGA TCTGGATACC CTCGCCGAGC GCTACTTGCA ACATCAGAAT ATCCGCTACG AAGAGGTGGT CGGCAAAGGC AAGTCAGCGC GTAATTTCGC CGATGTGCCG GTAGCGGAGG CGCTGCCCTA CGCGGCAGAG GATGCCGATG TCTGTCTGCG TGTGGACGCG CTGCTCTGGC CGCGGTTCGC CAGCGAGCCG GGCTTGCGGC GCGTGTTGAT GGAAATAGAG ATGCCGCTGG TGCTGGTGCT GGCGCGTATG GAAGAAGCGG GCGTCAAAAT CGATCGTGCC CAGCTCGAAG TGCTGAGCAC GGAACTGAGT AGAGACATGG CGGACTGTGA ACAGAAGGCC TTTGTTCTGG CGGGGCAGTC CTTCAACCTC AACTCCCCAA AGCAGATTCA GGAAATTCTC TTCGACAAGA TGCGGTTGCC GGTACTCAAG AAAACCCCCG GCGGTCAGCC GTCGACCAAT GAAGATGTGC TCGCCCAGCT CGCTGTTCAT GCCGATCTGC CGCGCCTGAT TCTGGATTAT CGTGGCATGG CCAAGCTCAA GAACACCTAT GCGGATGCAC TGCCGCAGAT GATCAATCCC GACACCGGCC GGGTCCATAC CCATTTTCAG CAGGCGGTCG CGGCCACCGG ACGCCTTTCC TCCAACGATC CGAACCTGCA AAATATCCCG GTGCGTACCG AACAGGGTCG GCGTATCCGC CAGGCTTTTG TCGCCGAGGA GGGGCACTGG CTGCTGAGCG CCGATTACTC ACAGATCGAA CTGCGTATCC TGGCCCATCT CTCCGGGGAT GCACGCCTGT TGCAAGCCTT TGCGGAGGGC GAGGACATTC ATGCGGTTAC CGCTGCCGAG GTCTTTGATC TGGCTCCGGA AGATGTGGAC AGTGCCGCAC GTCGTGCCGC CAAGGCTATC AACTTCGGTC TGATTTATGG GCAGACGCCC TACGGCCTTG CGCAACAGTT GGGCATTGAT CAGGCGGCCG CGCGGCAATA CATGGACCGT TACTTCGAGC GCTATCTGGG TGTTCTCGAA TATATGGCGC AGACCCGTGC CCTGGCGAAA AAGCAGGGCT ATGTGGAGAC ACTCTTTGGC CGTCGCCTGT ATGTACCGGA GATTCGCTCC AGCAACCCGG CTCGGCGTAC TTATGCCGAG CGTGCCGCCA TTAACGCACC TATGCAGGGC ACTGCGGCGG ATCTCATCAA GATGGCGATG ATTGCCGTGG ATGCCTGGTT GCAGGAACGG CCCGAGCGTG GTCGGATGAT TCTCCAGGTA CATGACGAAC TGATTCTGGA GGTGCCGGAG GCCGGCCTGG AGGCTGCGAA GTCGGCACTA AAGGCGCGTA TGGAGGGGGT AGCGGAACTG GCGGTGCCGC TCCTCGTGGG GTTGGGTATC GGCAAGCACT GGGATGAAGC GCATGGCTGA
|
Protein sequence | MPQDPRILVD ASSFLYRAFH ALPDLRAPDN LPTGAIYGVA NMLRRLLKEH PSDEIIVIFD APGGTFRDRL YPEYKAHRPA MPEELRVQVP LLHDWIRATG LPLVIEPDVE ADDVIGTLAR EAAPDQQVLI VTGDKDMAQL VNSRVRLIDT MKGIETDAAG VEERFGVPPE RIADLLALIG DKVDNIPGVP GVGPKTAARW LTQYGDLDGV LAHAGDIGGK VGEALRASAH YLPLSRDLAT IRCDLTLPVA TYARRAADVV ALRALAQRLG FQAWLRDLPA GDAGKVPEKR SSDIDRAAYR AITTAEALDV LLLALKAADV VALDTETTSL DPLHADLVGI SCAWQAGGDY QAVYVPVGHR DAGPQLDRQT VLTALRPWLE DPQAAKLAQN AKYDWRVFWR HGIHPAGLAR DTLLESYVLN SSHNGHDLDT LAERYLQHQN IRYEEVVGKG KSARNFADVP VAEALPYAAE DADVCLRVDA LLWPRFASEP GLRRVLMEIE MPLVLVLARM EEAGVKIDRA QLEVLSTELS RDMADCEQKA FVLAGQSFNL NSPKQIQEIL FDKMRLPVLK KTPGGQPSTN EDVLAQLAVH ADLPRLILDY RGMAKLKNTY ADALPQMINP DTGRVHTHFQ QAVAATGRLS SNDPNLQNIP VRTEQGRRIR QAFVAEEGHW LLSADYSQIE LRILAHLSGD ARLLQAFAEG EDIHAVTAAE VFDLAPEDVD SAARRAAKAI NFGLIYGQTP YGLAQQLGID QAAARQYMDR YFERYLGVLE YMAQTRALAK KQGYVETLFG RRLYVPEIRS SNPARRTYAE RAAINAPMQG TAADLIKMAM IAVDAWLQER PERGRMILQV HDELILEVPE AGLEAAKSAL KARMEGVAEL AVPLLVGLGI GKHWDEAHG
|
| |