Gene AFE_3075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_3075 
SymbolrplM 
ID7137069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp2763339 
End bp2763767 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content54% 
IMG OID643531426 
Product50S ribosomal protein L13 
Protein accessionYP_002427442 
Protein GI218665700 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0102] Ribosomal protein L13 
TIGRFAM ID[TIGR01066] ribosomal protein L13, bacterial type 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACCT ATTCTGCCAA GTCTCACGAA GTACAAGGGG ACTGGTTCGT GGTGGATGCC 
ACCGATAAAG TCCTGGGCCG CCTCTCTGTA GAGCTGGCTA AACGTTTGCG TGGCAAGCAT
AAGCCCGAGT ATACGCCCCA TGCCGATACT GGCGATTACA TTGTCGTCAT CAATGCCGAC
AAGATCGCGG TTACCGGCAA CAAGGCCAAA GATAAAATTT ATTACCATCA CACCGGCTAT
GTCGGCAACC TGAAGAGTGC TTCCTTCGAG AAGATGAAGG AGACGCACCC TGAGCGGATC
ATCGAGCTTG CGGTCAAGGG CATGCTGCCC AAGAATCCGC TGGGTCGGGC GATGTTCAAA
AAGCTCAAGG TCTATACTGG CTCCGAGCAT CCCCATTCGG CACAGCAGCC GCAGCCCCTG
AACGTTTAA
 
Protein sequence
MKTYSAKSHE VQGDWFVVDA TDKVLGRLSV ELAKRLRGKH KPEYTPHADT GDYIVVINAD 
KIAVTGNKAK DKIYYHHTGY VGNLKSASFE KMKETHPERI IELAVKGMLP KNPLGRAMFK
KLKVYTGSEH PHSAQQPQPL NV