Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_3068 |
Symbol | pdhC |
ID | 7136320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 2755513 |
End bp | 2758464 |
Gene Length | 2952 bp |
Protein Length | 983 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643531419 |
Product | pyruvate dehydrogenase complex, E2 and E3 components |
Protein accession | YP_002427435 |
Protein GI | 218666216 |
COG category | [C] Energy production and conversion |
COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01349] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGAAC CTTACGTCAT CAAAATGCCG CAACTTTCCG ACACCATGAC GGAAGGTGTC CTTGTATCCT GGGAGAAGCC TGCGGGCGCG CGGGTAGAGC GTGGCGACGT GGTGGCGACG GTGGAAACGG ACAAGGCCAT CATGGATGTC GAGGTGTTTC GTTCCGGTTA CCTGGCGGGG CCCCTGGCCG AGGCCAACAG TGTCATTCCG GTGGGCGGGA CTATCGGCTA TATCACCGAT AGCGCGGTGG AAACGGTGGC AGCGCCTGTT CCTGCAGCGC CTGCGGTCGT GCCGACGGGG CCGGCATCCG CTACGCCACC CGCCCCTGAG GGCTATGCGG TGAAGATGCC GCAGCTCTCC GACACCATGA CCGAAGGTGT GCTGGTATCC TGGGAAAAGG CACCGGGGGA CAGGATACAG CGCGGGGATG TGGTGGCGAC GGTGGAAACG GACAAGGCCA TCATGGACGT GGAAGTGTTC CGTGAGGGAT ACCTGTCGGG TCCTTTGGTG GCCGTGGATG CGGTGGTGCC CGTAGGAGAG GCCATCGCCT GGCTAGTGGA GTCACCGGAG CAGGTAAGCC ACGAAAACGC TGTCCATGAC GGAGGGCTGC GCCAGCCCGA TGCGACATCG GCGCCGGTAG CGACTCCCTT GCCTGCTGCC GCCATGTCTG GCCCAGTACC GGGCGCAGAT CCGGCGCCGC GTCCGCAGCA AGGGGCCGCC AGCCCCTTTG CCCGGCAGTT GGCGGGCCAG CGAGGTGTGG ATATCAACGG GCTGCGCGGT ACGGGGCCAG CGGGCGTGAT CGTCGCCGCA GATGTTCTCG GCGCTGCTGG TGGCCGTGCA GCCCCGGTCG CGTCGAGCGG TACTGCCGAG CCCGCGGTGC CCGGTAACGG CCGCGCCATG ACGGCCATCG AAAGAGCGAT CAGCCAGGCG ATGGCCGCTT CCCTGAGTAT TCCGGTTTTT CATGTCACCG TGCAGGTCAG GCCCGAGGCG CTGATCCGCG CCGCCAAGGC ACACAAGCTT TCCGTCACGG TGGCGATCGC CAAGGCCGCT TCGCAGGCGT TGCACCGACA CCCTCTGGTG AATGCCGCTT ATCAGCCTGT GGATAAGATT GTCGAACGCA GTCAGCATGA CATCGGCATT GCCGCGACTA CGGAAGACGG TGGTCTGATT GTGCCTGTCC TGCGCGGTGT CGAAGGCAAG ACGCCGGAGC AGTTGCAGAC GGAGTGGACC TCATTGCTGG AGAAGGCGCG CAAACGTCGT CTCAGTCCAC CTGAATATAC CAACCCTACC TTTACCATCT CGAACATGGG GATGTACGGC ATTGCCCAGT TCGATGCCAT CGTCACCCCG GGGACGGCGG CCATCATTGC GATCGCCGGG AATGGACCCG AAGGCATGCC CATCACCATC ACGGCAGACC ACCGGGTGGT CAATGGCGCC GAGGCGGCGC TGTTCCTCAA TGACCTGAAA CAGGCCATTG AGCATCCCGA GAACTGGCTG GGTAGCGGCG GCCCGGTGAT TCCCGAAGGG GATTACGACG TGCAAGTGCT GGTCATCGGC GCAGGCCCCG GCGGCGAAGA CTGCGCCCGC GAGCTCGCAG AGAACGGTAT CAGGGTGGCC ATGGTCAACG ATGCGCCCCT GCCGGGCGGC GAATGTCTGT GGCGGGGCTG CATTCCCTCC AAGGCTTGGC GCGCTGCTGC GGATCGCATC CGCGACCGCG AGCACGACGC GGCGATGGGC ATTACCCTGG GCACTCCCAG GCTGGATTGG GCACAACTGG AACAGCATCG GCGCGGTATT CTCCAGACCC GCGGAGAAAT GGCCCTGAAA ACCGATCAGG GTGTGAAAAT TCAGGTGCTG GAAGGCTATG CCCGTTTCAC CGGTGACCAC AGCGTCGAGA TCAGCGGCAA GGATGCGCGG ACCCTGACCT TCGGAGCCTG TGTCATTGCT ACGGGCGCAC CCGCCTTTGT GCCGCCGATT CCCGGCATTC AGGACGCGTT GAAGAGTGGT GCGGCGGTGA CTTCCGATAC GGTCTGGAAC CTGAAACAGC CGCCCGCGCG CCTCTGCGTC ATCGGCGCCG GCGCCATCGG TATGGAAATG GCGCAGATGT TCCACGACTT CGGCGCCGAA GTGCGGGTAC TGGAAGCCCT GCCACGGCCG GTGGCCGAGA TGGAAAAGGA AGTCGCCGAA CAGTTGATGA AGGCCATCGC CCATAACAGC CTGCGTTTGC AGGTGCTGAC CGGAGTCAAG GTGACGGAGG TCGCGGGGCA ACCCGGCCAG TTGGAGGTGC GTTACCAGTC AGGCGACGAG GCGGCGAATT ATGCCTGTGA TCTGCTGCTG GTGGCGACGG GTAAGCGCCC GGATACCAGT GGGCTGAATC TGGCCGCGGC CGGTGTGGCT TTGGGAGATC GCGCCGTCAT CGCCGTCGAT GCCTCCGGGC GCACCAATGT GCCCCATATC TATGCGGTCG GTGATGTCAT CGGCGGCTAC ATGCTGGCCC ACACCGCCGG TCAGCAGGGA CGGGTGGCGG CCGCCAGTTT GCTTGGCCAC AGCGCTCGTT ATGAAGCGGC TAAAGACTGC GGGGTGACCT TCACCCGGCC CCAGTGCGCG TTTGTCGGCC TTTCCCTGGA GCAGGCCAGG GCGGAAGGGA TCGACGCGGT CGAGGTCAAG GTGCCCCTGA GCATCGATGC CAAGGCCATG ATGACCGGCG AGACCGACGG ACTGATCAAG ATCGTCGCCG ACAAGATCAG CCACCGTATC GTCGGTGTGC ATTTCCTCGC CGATCATGCC GATACCCTGG TGGGCGAGGC CGTGATGATG GTCAGCGCCG GTTTGACCCT GGAGCAGGTG GCTGGCGCCA TTCATCCCCA TCCGACTCAG ACCGAACTCT TCGGCGAAAT GGCGCGACGC CTGTTATCCC GCCTGCGGCG CAGTGCCCGG GCGGCGAGCT GA
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Protein sequence | MAEPYVIKMP QLSDTMTEGV LVSWEKPAGA RVERGDVVAT VETDKAIMDV EVFRSGYLAG PLAEANSVIP VGGTIGYITD SAVETVAAPV PAAPAVVPTG PASATPPAPE GYAVKMPQLS DTMTEGVLVS WEKAPGDRIQ RGDVVATVET DKAIMDVEVF REGYLSGPLV AVDAVVPVGE AIAWLVESPE QVSHENAVHD GGLRQPDATS APVATPLPAA AMSGPVPGAD PAPRPQQGAA SPFARQLAGQ RGVDINGLRG TGPAGVIVAA DVLGAAGGRA APVASSGTAE PAVPGNGRAM TAIERAISQA MAASLSIPVF HVTVQVRPEA LIRAAKAHKL SVTVAIAKAA SQALHRHPLV NAAYQPVDKI VERSQHDIGI AATTEDGGLI VPVLRGVEGK TPEQLQTEWT SLLEKARKRR LSPPEYTNPT FTISNMGMYG IAQFDAIVTP GTAAIIAIAG NGPEGMPITI TADHRVVNGA EAALFLNDLK QAIEHPENWL GSGGPVIPEG DYDVQVLVIG AGPGGEDCAR ELAENGIRVA MVNDAPLPGG ECLWRGCIPS KAWRAAADRI RDREHDAAMG ITLGTPRLDW AQLEQHRRGI LQTRGEMALK TDQGVKIQVL EGYARFTGDH SVEISGKDAR TLTFGACVIA TGAPAFVPPI PGIQDALKSG AAVTSDTVWN LKQPPARLCV IGAGAIGMEM AQMFHDFGAE VRVLEALPRP VAEMEKEVAE QLMKAIAHNS LRLQVLTGVK VTEVAGQPGQ LEVRYQSGDE AANYACDLLL VATGKRPDTS GLNLAAAGVA LGDRAVIAVD ASGRTNVPHI YAVGDVIGGY MLAHTAGQQG RVAAASLLGH SARYEAAKDC GVTFTRPQCA FVGLSLEQAR AEGIDAVEVK VPLSIDAKAM MTGETDGLIK IVADKISHRI VGVHFLADHA DTLVGEAVMM VSAGLTLEQV AGAIHPHPTQ TELFGEMARR LLSRLRRSAR AAS
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