| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_3057 |
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| Symbol | |
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| ID | 7136152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 2744939 |
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| End bp | 2747464 |
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| Gene Length | 2526 bp |
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| Protein Length | 841 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643531408 |
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| Product | sensory box-containing diguanylate cyclase, putative |
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| Protein accession | YP_002427424 |
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| Protein GI | 218667425 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTTCTTT CCGGCGCCAA TGAAGTCATC GCCTATACGG AAAACGAAAC GGATCTGCTG
CGATCCCTCT GCGAATTGGC CGTCCGGCAC ACCCATCTGC GGCTGGCGTG GATTGGCCGG
CCCGATAGTG ATGGCATCTT CCAAAACCTC GCCGCCGCCG GGGCGGTGCG CTACCTGGAA
GGTATCCGCA TATCCACATC CGCGGAACTT CCCGAGGGAC AAGGCTCCGC AGGCCAGTCC
TGGCGCGATC AAAAACCGGT TTACAATGCC TCGCTCCCCA AAAATGTCCG CATGAACCTC
TGGGCGCAAC GCGCCAAAGC CTTTGGGTTC GGGGCAAGCG CATCGCTGCC GATTTATCGG
GGCAACACGC TGTGGGCCAT CTTGATGGTC TATCACGGCA AGAAAAACGT CTTCGATGCC
GACTTCCGGA GAATAATGAC GGATCTGGCC AAAAACGTCA GTTACGGCCT GGATCGTTTG
GACATCCGGC GAAAGGAGCG GGAATCAAAC GCTTTCAACG AAGTGCTGCT GAACGACCAG
GCATCCGGCA TCAGCGTCGT GCGTTTTCCG GAACAGATTG TCGAGCGAGT CAACACGCGG
ATGCTGACAA TCCTCGGCGC GTCTTCCGCG GATGAGCTGA TCGGACATCC CGTATGGGGG
ATCATTCACC ATGAGGAAGT CGGTGAGCAG GTTGGCCAGT TTGCCCTGGA GGTTCTCAGC
GAAGGCTACG CAACACGCAG GGATGTGCCC TATCGCCGCC TGGATGGACA AATGGTTTTC
ACGGATATTT CAGGCCAGCG CCTGGACGGA TCGGATGGTG TGCAACGTAT CCTCTGGACT
CATGTGGATG TGACGGAGCG CCATCGGCTC ATGGATGAAC TCACGCAGTT GTCGCTTTCC
GACCCACTCA CCGGCCTGCC CAATCGCCGC GCTCTGGATA CAGAACTGGG CAAGGCCATG
GCCCGCGCTG ATCGTCATGA ACACCTTTTG AGCGTCGTCA TGATCGATCT CGACGGCTTC
AAACCAGTCA ACGACACCTG TGGCCACGAA GCCGGGGATA TGGTGTTGCG GACCATCGGC
CAGCGTTTAC GGAAAGGATT GCGCGGCACG GACTTCGTGG CCCGCCTGGG TGGCGATGAG
TTCGTTCTGC TCCTGGAGAA CTGCACCGCC CTGGAGGAGA TCGAAGTGGT CATGAGGAAG
ATCGGGGAAA TGATCCGGCA ACCCATCGAA CTCCCCGACA AGAGCAGGGC GGAGATCGAT
CTCAGCGCCG GCATATGCCT CTATCCTTTC GGCGATTCCC ACAATCCCGA TGCGCTGCTC
CGCTATGCCG ATCAAGCACT TTACGAGAGC AAAAACCACA AGGCGGATCG CGTGCATTAC
TGGACCCTCT TCGGAGATTC GGTACCAGTG CGGCAGAACG TCATCCAGAC ACGGTTGCGG
GAAGGTGGAT TGCTGGTCCA TTACCAGCCC ATACTCGACA ATCGCTCCCA CAAGATCGTG
GGTGTGGAGG CTTTGGCGCG GCTGCGGGAC AAGGATGGGC AGATACTCTA TCCGGCGGAG
TTTCTGCCTT TGATCACTGT CGAGGACACC ACCTATCTCA GCAGGATGGT GCTTACCCAG
GCGCTGGCGG ATCTGGCCGA GCTGGATACC TTGGGATGCT CGCTCTGGGT GTCCGTGAAC
GTAGCCCCGG AGTCCTTCGA TGACCACTTC GTTCCATGCA TGGCAGGCGT TATCGGAGCC
AGCGATATCG CACCTTCCCG GATCACGCTG GAGATCCTGG AGAGCAGCAA CTTCCTGGAG
CATAACGCCG CGTTGTCCGT TCTTCACGGC GTCAAAGAAC TGGGCGTTCG CCTCGCTCTG
GATGATGTGG GCAGTGCGTA TTCCTCACTG CTCCGCCTCA AGGACTTGCC CATTGATGAA
ATCAAGCTGG ATCAGGGATT TATCCGCTCC CTGGAGGATC GGCCCCAGGA TTTGTATTTT
CTTGCTTCCA TTCGGGATTT GGCCATCGGC CTGGGAGTGG ATCTGGTGGT GGAAGGGGTC
GAAACAGATG ACATTGCGGA TGCAGTCTCG GTCATGGACA TTAAATTACT GCAAGGCTAT
GGTGTCGCCA GACCCATGCC CATGGCGCAG TTACGGGAAT TTCTAGCCCA ACGTCCGTCC
TATCATCGAC AGCATCCGAC CAGCTTGTTC GGACTTTATG CCAAACAGAT CTGCGACCAG
GGAACCTTGA AAAAAATGAT CCTCAGCAAT CCGAGCCTGA TCAATAGCGA TGAATTGGCG
GATGCCGCCC GTTGCGACAT GCATCACCAT ATGCAGCGCC TGGGTCTCGC TGAAGACTCT
CCCTTATTTG GGCTTCATTG GGAGGTCCAT GGTGCCATCG CATCGTTGTT AAAGGCTCCG
GTCGCGGAAG GCTGGGAGCA AGTTCGGCAG GTGCAAAAGG CATTTGAGGA TGGCTTGCTG
GAAGCTTTCC AGAAAGCAAA GACCTGTCGA TCACCAGGCA GTGGTCTATC TTCCGTCCCG
GTTTAG
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| Protein sequence | MLLSGANEVI AYTENETDLL RSLCELAVRH THLRLAWIGR PDSDGIFQNL AAAGAVRYLE
GIRISTSAEL PEGQGSAGQS WRDQKPVYNA SLPKNVRMNL WAQRAKAFGF GASASLPIYR
GNTLWAILMV YHGKKNVFDA DFRRIMTDLA KNVSYGLDRL DIRRKERESN AFNEVLLNDQ
ASGISVVRFP EQIVERVNTR MLTILGASSA DELIGHPVWG IIHHEEVGEQ VGQFALEVLS
EGYATRRDVP YRRLDGQMVF TDISGQRLDG SDGVQRILWT HVDVTERHRL MDELTQLSLS
DPLTGLPNRR ALDTELGKAM ARADRHEHLL SVVMIDLDGF KPVNDTCGHE AGDMVLRTIG
QRLRKGLRGT DFVARLGGDE FVLLLENCTA LEEIEVVMRK IGEMIRQPIE LPDKSRAEID
LSAGICLYPF GDSHNPDALL RYADQALYES KNHKADRVHY WTLFGDSVPV RQNVIQTRLR
EGGLLVHYQP ILDNRSHKIV GVEALARLRD KDGQILYPAE FLPLITVEDT TYLSRMVLTQ
ALADLAELDT LGCSLWVSVN VAPESFDDHF VPCMAGVIGA SDIAPSRITL EILESSNFLE
HNAALSVLHG VKELGVRLAL DDVGSAYSSL LRLKDLPIDE IKLDQGFIRS LEDRPQDLYF
LASIRDLAIG LGVDLVVEGV ETDDIADAVS VMDIKLLQGY GVARPMPMAQ LREFLAQRPS
YHRQHPTSLF GLYAKQICDQ GTLKKMILSN PSLINSDELA DAARCDMHHH MQRLGLAEDS
PLFGLHWEVH GAIASLLKAP VAEGWEQVRQ VQKAFEDGLL EAFQKAKTCR SPGSGLSSVP
V
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