| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_3051 |
|---|
| Symbol | rbcL |
|---|
| ID | 7134415 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | + |
|---|
| Start bp | 2739425 |
|---|
| End bp | 2740846 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643531402 |
|---|
| Product | ribulose bisophosphate carboxylase |
|---|
| Protein accession | YP_002427418 |
|---|
| Protein GI | 218667567 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGTCA AGACCTATAA CGCGGGTGTG AAGGATTACC GGAACACCTA TTGGGAACCG
GATTACAGCG TCAAGGATAC CGATATCCTT GCCGTGTTCA AGATTACTCC CCAGGCGGGC
GTGGATCGTG AGGAGGCCGC TGCTGCGGTT GCCGCCGAAT CCTCTACCGG CACCTGGACC
ACGGTGTGGA CGGACCTTCT CACCGACCTT GACTACTACA AGGGGCGCGC ATACAGGATT
GAAGACGTTC CGGGCGATGA TACCTGTTTC TATGCGTTCA TTGCCTACCC CATCGATCTC
TTCGAAGAAG GTTCCGTGGT CAACGTCTTC ACCTCGCTGG TTGGTAACGT CTTCGGCTTC
AAGGCGGTAC GTGCCCTGCG CCTGGAAGAC GTCCGTTTCC CCATCGCCTA CGTCAAGACC
TGCGGTGGGC CACCCCACGG GATTCAGGTC GAACGCGACA TCATGAACAA GTATGGTCGC
CCATTGCTGG GCTGCACCAT CAAACCCAAG CTGGGTTTGT CGGCCAAGAA CTATGGTCGC
GCCTGCTATG AAGGTCTGCG TGGTGGACTC GACTTCACTA AAGATGACGA AAACGTCAAT
AGCCAGCCTT TCATGCGCTG GAGGCAGCGT TTCGACTTCG TCATGGAGGC CATCCAGAAG
GCCGAGGCCG AGACCGGAGA GCGTAAGGGG CACTACCTGA ACGTTACCGC CCCGACTCCG
GAGGAAATGT ACAAGCGTGC GGAGTACGCC AAGGAAATCG GCGCACCCAT CATCATGCAC
GATTACATCA CCGGCGGCTT CTGCGCCAAC ACGGGTCTGG CCAACTGGTG CCGCGACAAC
GGCATGCTCC TGCACATTCA CCGCGCCATG CATGCGGTGC TGGACCGCAA CCCTCACCAC
GGCATCCACT TCCGTGTGCT GACCAAGATT CTCCGTCTGT CCGGCGGCGA TCACCTGCAC
TCGGGTACCG TGGTCGGCAA GCTCGAAGGC GACCGTGAGG CGACCCTGGG CTGGATCGAC
ATCATGCGTG ATAGATTCAT CAAGGAAGAT CGCAGCCGAG GCATCTTCTT CGACCAGGAC
TGGGGCTCCA TGCCGGGTGT GATGCCGGTC GCTTCCGGTG GTATCCACGT TTGGCACATG
CCGGCGCTGG TCACCATCTT TGGTGATGAC TCGGTGTTGC AGTTCGGTGG CGGCACCCTC
GGTCATCCCT GGGGCAATGC CGCAGGTGCT GCGGCCAACC GCGTCGCGCT GGAAGCCTGT
GTGGAAGCCC GCAACCGCGG TGTGGCCATC GAGAAGGAAG GCAAGGCTGT TCTCACTGAG
GCGGCCAAGC ACTCCCCCGA ACTCAAGATT GCCATGGAAA CGTGGAAAGA GATCAAGTTC
GAATTCGATA CGGTCGACAA GCTGGACGTT GCCCATAAAT AA
|
|---|
| Protein sequence | MAVKTYNAGV KDYRNTYWEP DYSVKDTDIL AVFKITPQAG VDREEAAAAV AAESSTGTWT
TVWTDLLTDL DYYKGRAYRI EDVPGDDTCF YAFIAYPIDL FEEGSVVNVF TSLVGNVFGF
KAVRALRLED VRFPIAYVKT CGGPPHGIQV ERDIMNKYGR PLLGCTIKPK LGLSAKNYGR
ACYEGLRGGL DFTKDDENVN SQPFMRWRQR FDFVMEAIQK AEAETGERKG HYLNVTAPTP
EEMYKRAEYA KEIGAPIIMH DYITGGFCAN TGLANWCRDN GMLLHIHRAM HAVLDRNPHH
GIHFRVLTKI LRLSGGDHLH SGTVVGKLEG DREATLGWID IMRDRFIKED RSRGIFFDQD
WGSMPGVMPV ASGGIHVWHM PALVTIFGDD SVLQFGGGTL GHPWGNAAGA AANRVALEAC
VEARNRGVAI EKEGKAVLTE AAKHSPELKI AMETWKEIKF EFDTVDKLDV AHK
|
|---|
| |