| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_3041 |
|---|
| Symbol | hisD |
|---|
| ID | 7137196 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | + |
|---|
| Start bp | 2731557 |
|---|
| End bp | 2732858 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643531392 |
|---|
| Product | histidinol dehydrogenase |
|---|
| Protein accession | YP_002427408 |
|---|
| Protein GI | 218665150 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0141] Histidinol dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.2292 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGTC TGGACACCAG CGACCCTGAT TTCGCCCAGC AGTTTCACGC GCTGCATGAT
TGGGATGCCA ACCTCGATCC GCAGATCGAA GTGCGGGTAC GAGAGATCGT CACCACCGTC
CGTGATCGGG GCGATGCGGC GCTACGCGAG TACACGGAGC GCTTTGATGG GGTGACGACG
GCTTCCGCCG CTGAGCTGGA GATCCCCCGC AGTGCCTGGG ATGCGGCGCT CCACGGTCTG
GAGCCCACCC AGCGAGTTGC CCTGGAAGAG GCGGCGCAAC GTATCCGCAG TTACCACGAG
CACCAGCGCA GTGTAGGCTG GACCTTTACC GAGGCCGACG GCACGATGCT CGGACAGCGC
ATCCTGCCCT TGGCCCGGGT GGGGATTTAC GTACCCGGCG GCAAGGCGGC TTATCCCAGC
TCCGTGCTGA TGAATGCCAT TCCCGCGCAC GTGGCGGGCG TGAAGGAAAT CATCATGACC
GTACCCACCC CGCAGGGGCA GGTGAATCCC TGGGTGCTGG CCGCAGCCGC CATTGCCGGG
GTGGACCGGG TGTTCTGTAT CGGCGGTGCG CAGGCAGTGG CGGCGCTCGC CTACGGTACG
GAGAGCGTCC CCGCGGTAGA CAAGATTGTC GGCCCCGGCA ATATCTATGT GGCTACCGCC
AAGCGCATGG TCTTTGGCCG GGTAGGCATC GATATGATTG CCGGACCCAG CGAAATCCTC
GTGATCAGCG ATGGCTCGGC ACCGGCGGAA TGGTTGGCCT GGGACCTGCT CTCACAGGCG
GAGCATGATG AGATTGCCCA GAGTATTTTC ATCAGTTGGG ACGATGCCCA CATCGAGTCG
GTGGTGAACG CGGTGGATGC CGCCCTCGAT GTGCTCGATC GCGCACCCAT CGCCCGCAAG
AGCTGGGCAG ACCGGGGGGC GGTGATTCGT GTGCGGGACC GTGCCGAGGC CTGCGCCATT
GCCGACCGTA TCGCGCCGGA ACATCTGGAA CTAGCGGTGC AGAATCCCGA AGACTGGCTG
GCGGACATTC ACAATGCCGG GGCCATCTTC ATGGGCATCC ATAGTTGTGA GGCCCTCGGC
GACTATGTGG CCGGCCCCAA CCATGTGCTG CCCACGGGGG GCAGCGCACG TTTTTCCTCG
CCCCTCGGCG TCTATGATTT CGTCAAGCGG AGCAGCCTCA TTCACAGCAG CCCCGCCGGC
GCCGCGCGAC TGGGACAGAT CGCCGAACGT CTCGCCCTGG GCGAGGGCCT GACCGCCCAT
GCCCGTTCAG CAGCCTGCCG CATCCCCGAA GCCGGATCAT GA
|
|---|
| Protein sequence | MNRLDTSDPD FAQQFHALHD WDANLDPQIE VRVREIVTTV RDRGDAALRE YTERFDGVTT
ASAAELEIPR SAWDAALHGL EPTQRVALEE AAQRIRSYHE HQRSVGWTFT EADGTMLGQR
ILPLARVGIY VPGGKAAYPS SVLMNAIPAH VAGVKEIIMT VPTPQGQVNP WVLAAAAIAG
VDRVFCIGGA QAVAALAYGT ESVPAVDKIV GPGNIYVATA KRMVFGRVGI DMIAGPSEIL
VISDGSAPAE WLAWDLLSQA EHDEIAQSIF ISWDDAHIES VVNAVDAALD VLDRAPIARK
SWADRGAVIR VRDRAEACAI ADRIAPEHLE LAVQNPEDWL ADIHNAGAIF MGIHSCEALG
DYVAGPNHVL PTGGSARFSS PLGVYDFVKR SSLIHSSPAG AARLGQIAER LALGEGLTAH
ARSAACRIPE AGS
|
|---|
| |