Gene AFE_3024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_3024 
SymbolyfiA 
ID7134252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp2716790 
End bp2717131 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content55% 
IMG OID643531375 
Productribosomal subunit interface protein 
Protein accessionYP_002427391 
Protein GI218667495 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1544] Ribosome-associated protein Y (PSrp-1) 
TIGRFAM ID[TIGR00741] ribosomal subunit interface protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGATTA CCATTACCGG GCAGCACCTG GATTTGACGG ATTCCATCAA AAACTATGCC 
GATGAAAAGA TCGGGCGCCT TGGCCGTTAC TTCGATCACG TCAGCAACGC TCAGGTGGTG
CTAAAGCACC TCCCCCACGA AAAACTGAGC AACGTCGTGG ACATTACGGT CAATGCTCCG
GGGCACGTCT TCCATGCGGA GGTGCATGAT GCCGATATGT ACACGGGCAT AGATCTGGTG
GCCGACAAGC TGGAGGCGCA GGTGCGCAGT TACAAGGAAA AACTGCAGGA TCGACGTAAT
GACCAACCCG CCGGTTTGGC GGCCATTGTT GAAGCCGACT GA
 
Protein sequence
MQITITGQHL DLTDSIKNYA DEKIGRLGRY FDHVSNAQVV LKHLPHEKLS NVVDITVNAP 
GHVFHAEVHD ADMYTGIDLV ADKLEAQVRS YKEKLQDRRN DQPAGLAAIV EAD