Gene AFE_3020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_3020 
Symbol 
ID7136093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp2714038 
End bp2714454 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content63% 
IMG OID643531371 
ProductPTS system, IIA component, putative 
Protein accessionYP_002427387 
Protein GI218666589 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2893] Phosphotransferase system, mannose/fructose-specific component IIA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACCA TCGTGCTCCT GACCCATGCC GGTATGGGTC AGGCCTTTGC AACCGCGCTC 
CGGCATATTT TCGGGACCAT GCCGCCGGCG CTGGAAGTGC TGGAAATTCT GCCTGATCAG
CCGCCTGAGG AAGGTCGGCG GCGCTTGTGG AGCTTGCTGG AGAAAATGCC CGAGGGCGAT
GCCATGCTGA TCTTGAATGA TCTTTACGGA GCCACTCCCG CCAACCTCAT TCCAGCCATT
CTCCCGGAAG ATCGGGTGGC GGCGGTGAGC GGCCTGAATC TCGCCATGCT TCTGCGTGCC
TTGTCGCGGC GCAGTGAAGG ATTGGCGGCA GCGCGCCAGG GCGCCCTGGA GGGTGGGGTC
CGCGGTGTCG TCGATATCCT CGCGCGCCGG AATACACCAG AATTGCGGGA GGGCTGA
 
Protein sequence
MITIVLLTHA GMGQAFATAL RHIFGTMPPA LEVLEILPDQ PPEEGRRRLW SLLEKMPEGD 
AMLILNDLYG ATPANLIPAI LPEDRVAAVS GLNLAMLLRA LSRRSEGLAA ARQGALEGGV
RGVVDILARR NTPELREG