| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_3012 |
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| Symbol | |
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| ID | 7134154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 2704984 |
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| End bp | 2706027 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643531363 |
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| Product | capsule polysaccharide biosynthesis protein |
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| Protein accession | YP_002427379 |
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| Protein GI | 218666718 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3563] Capsule polysaccharide export protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAACC TGCAAGACCA CGAAATGCCG TCGATACTGT ATGCGGTAGG GTTCTCGCCT
TGGAAAAGGC GGAGTCTGCG GGCCTTTTTA CCAGGAACCC GGCTCCACTT CATAGAACAC
ATCGAAAGCG CGCCTCCGCA CAGCAATCTC TTGCTCTGGG GCAATAGCGA TATGGGGGGG
CAGGACGAGC GCAAGGTCAT CCGGGTAGAG GATGGGTTTC TCCGCTCGGT GGGATTGGGG
GCAGACCTGA TTCCTCCGAT TTCCTATGTC TTTGACCATT CCGGGCTATA TTACGACGCC
CGTCGCCCCT CGGATCTGGA AACTCTGCTG CAACATTTTG AAATGAATTC CGATCTTTTG
GCACGGGCGC AGTGGCTTCG AAAGCACATC GTGACCAGGG GTCTCACCAA ATATAATGTT
GGGGGCATCA CCTGGCGTCG ACCGCCTCAT GCGCGCCATG TCATCCTGGT GCCGGGGCAG
GTGGAGAGCG ACGCATCCAT CCTTCTGGGG TGTGCTTCCA TTCGCACCAA CATGCAACTC
TTGCGGCAGG TGCGTGCGCA GCATCCCGAC AGTTATCTGG TGTACAAACC CCACCCCGAC
GTGGTGGCGC GCTTGCGCCG CCCGGGCGCG GATGAGGGGG AGGCATCCGG TTATTGCGAC
GAAGTGGTGA CGGATGTATC CATGCATGCG TTGCTGGAGG CAGTGGATGC CGTGCACGTG
CTGACCTCTT CCACGGGCTT CGAAGCCCTT TTGCGCGCCA AACCGGTGAC TTGCCATGGA
GTGCCTTTCT ACAGTGGTTG GGGGTTGACC GATGACCGCA TTCCGGTGGC GCGGCGTCGC
CGCCGGCGAT CCCTGGATGA ACTGGTGGCC GCAGTGCTGA TACTCTATCC ACGCTATCTG
CATCCCCTGA CCAAAACCCT GTGCAGACCC GAGGAGGCCA TCGCGGGGTT GGGTGCGCTG
CGGGAACACG CCCCTGACCG CCGCACCCCC TTGTGGCGAA AAGGGTTTCG CATGGTCCTG
CGCCATGTCG TAGGCGTGAG ATGA
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| Protein sequence | MDNLQDHEMP SILYAVGFSP WKRRSLRAFL PGTRLHFIEH IESAPPHSNL LLWGNSDMGG
QDERKVIRVE DGFLRSVGLG ADLIPPISYV FDHSGLYYDA RRPSDLETLL QHFEMNSDLL
ARAQWLRKHI VTRGLTKYNV GGITWRRPPH ARHVILVPGQ VESDASILLG CASIRTNMQL
LRQVRAQHPD SYLVYKPHPD VVARLRRPGA DEGEASGYCD EVVTDVSMHA LLEAVDAVHV
LTSSTGFEAL LRAKPVTCHG VPFYSGWGLT DDRIPVARRR RRRSLDELVA AVLILYPRYL
HPLTKTLCRP EEAIAGLGAL REHAPDRRTP LWRKGFRMVL RHVVGVR
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