Gene AFE_3003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_3003 
Symbol 
ID7135698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp2692264 
End bp2692911 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content48% 
IMG OID643531354 
ProductMotA/TolQ/ExbB proton channel family protein 
Protein accessionYP_002427370 
Protein GI218665964 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATTCC AATATATCAT TCATCTCGCC AACTACTCGG ATGGCGTGCT TTATGTCTTA 
GCCCTCCTGT TTCTGATTGA ACTGGCGGTC ATTTTTGATC GTGCGTGGTT CATGCGCTCG
GCCTTACGCA AGGGTAAGAC CATCATTCAT AAACTCTCAG AGGTGGGCAA ACTGACCAGT
GAACAACTGG AAGAATTGAT GCAAGAGGCA AAAGGTCAAC CCGAAGAGCA AATCATCACT
GCAGCATATC GTCACATGGA TCTGGTTCAC CATTATGGCA GTGCCCGTGG AGAAGCCTTT
GATAATCGGC TTGACGAAGC TATTTTCCTG ACAACGCCTT TCCTGGACAA GCGTTTGTGG
ATTCTTGATA CTACGGTGAC TTTGGCGCCT CTTTTAGGGC TGTTCGGAAC GATTCTCGGT
ATGTTCCACG CTTTTTCCAT TTTGGCGACC CCAGGGCATG CACCTACTCA GGTTACGGGT
GGTGTGGCGG ATGCCCTCAT TGCTACCGCA TCCGGTTTGT TTATTGCCAT GGTTGGTCTG
ATTACTTTCA ATGCATTTAA CAACGCCATT GATAAAACTA TACAACAGCT CGAATCGATC
AAGTTGCTGC TGATCAATCG TCTGGACGGG GCACCCAACA AGATTTGA
 
Protein sequence
MSFQYIIHLA NYSDGVLYVL ALLFLIELAV IFDRAWFMRS ALRKGKTIIH KLSEVGKLTS 
EQLEELMQEA KGQPEEQIIT AAYRHMDLVH HYGSARGEAF DNRLDEAIFL TTPFLDKRLW
ILDTTVTLAP LLGLFGTILG MFHAFSILAT PGHAPTQVTG GVADALIATA SGLFIAMVGL
ITFNAFNNAI DKTIQQLESI KLLLINRLDG APNKI