Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_3003 |
Symbol | |
ID | 7135698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 2692264 |
End bp | 2692911 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643531354 |
Product | MotA/TolQ/ExbB proton channel family protein |
Protein accession | YP_002427370 |
Protein GI | 218665964 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCATTCC AATATATCAT TCATCTCGCC AACTACTCGG ATGGCGTGCT TTATGTCTTA GCCCTCCTGT TTCTGATTGA ACTGGCGGTC ATTTTTGATC GTGCGTGGTT CATGCGCTCG GCCTTACGCA AGGGTAAGAC CATCATTCAT AAACTCTCAG AGGTGGGCAA ACTGACCAGT GAACAACTGG AAGAATTGAT GCAAGAGGCA AAAGGTCAAC CCGAAGAGCA AATCATCACT GCAGCATATC GTCACATGGA TCTGGTTCAC CATTATGGCA GTGCCCGTGG AGAAGCCTTT GATAATCGGC TTGACGAAGC TATTTTCCTG ACAACGCCTT TCCTGGACAA GCGTTTGTGG ATTCTTGATA CTACGGTGAC TTTGGCGCCT CTTTTAGGGC TGTTCGGAAC GATTCTCGGT ATGTTCCACG CTTTTTCCAT TTTGGCGACC CCAGGGCATG CACCTACTCA GGTTACGGGT GGTGTGGCGG ATGCCCTCAT TGCTACCGCA TCCGGTTTGT TTATTGCCAT GGTTGGTCTG ATTACTTTCA ATGCATTTAA CAACGCCATT GATAAAACTA TACAACAGCT CGAATCGATC AAGTTGCTGC TGATCAATCG TCTGGACGGG GCACCCAACA AGATTTGA
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Protein sequence | MSFQYIIHLA NYSDGVLYVL ALLFLIELAV IFDRAWFMRS ALRKGKTIIH KLSEVGKLTS EQLEELMQEA KGQPEEQIIT AAYRHMDLVH HYGSARGEAF DNRLDEAIFL TTPFLDKRLW ILDTTVTLAP LLGLFGTILG MFHAFSILAT PGHAPTQVTG GVADALIATA SGLFIAMVGL ITFNAFNNAI DKTIQQLESI KLLLINRLDG APNKI
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