Gene AFE_2988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_2988 
Symbol 
ID7137223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand- 
Start bp2676618 
End bp2677628 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content58% 
IMG OID643531339 
Productpeptide ABC transporter, ATP-binding protein 
Protein accessionYP_002427355 
Protein GI218667046 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.534578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCCT GGTTGGAAGT GAAAAATCTG GATGTGCGGT TTCACCTGGG TGAGGGCGGG 
CTGCTCCGCC AGAGCCAGGG TACCATTCAT GCGCTGAGTG ATATCCATTT TGGTCTGGAG 
CAAGGACAGA CGGTGGGTTT GATTGGCGAG TCCGGTTCCG GGAAGAGCAC ACTGGGCCGC 
GCCATTCTCC ATCTGGTACG TCCCAGTGCC GGAGCGGTTT ACTTCAAAGG AACCAATCTG 
ACGGCCCTCC CTGAAAAACA GATGCGTCCC TTTCGTCAGC AGATGCAGAT GGTTTTTCAG 
GACCCCTTTG ATTCCATGAA TGCGCGCATG ACGGTCGGGC AGATCATCAT GGAGCCTTTG 
TTACTGCAGG GCATCGGCAC ACCCGGTGAA CGGCGGCGGA AAGCGGAGGC ATTGCTGGAG 
CGAATGGGAC TGCACCGGCG GGCCATGAAC CGTTACCCGG GACAATACTC AGGGGGACAA 
CGTCAGCGGA TTGCCATCGC CCGAGCGCTC ACTACGGAGC CACAATTGTT GGTACTGGAT 
GAGCCTACTT CTGGTCTGGA TGTTTCCATG CAGGCCCGCA TTCTGAATCT GTTGCGGGAT 
CTACAGAAGG AGATGGGCCT CAGTTATGTG TTCATCAGCC ATGATCTAGG CGCGGTTTCT 
TATCTCGCGC AAAATGTCAT CGTGCTGTAC CTGGGGCGTG TGGTGGAAAT CGCCCCCACC 
CCCACGCTCA TCTCCAGCCC CGCGCACCCT TACACCGCGT CGTTGCTGGA TGCTCTGCCG 
CCCATGGTCC GACAGGGGGA GCTGCCACAT CTACCGGAGC CGGTCGGTGA GCCGCCCTCA 
CCGGTGAATC CGCCCTCAGG CTGTGCCTTT CACACCCGTT GTCCGAAGGC TGAGGCCATC 
TGCAGCAGCG AAAGACCATT GCTTAGCTCT GTCGGGTTGG GTCATCAGGT GGCTTGCCAT 
TTTCCCTTGC GGGACGCGTA TCTGAGTAAG GGGGCCATTC ATGCTGAATA G
 
Protein sequence
MSAWLEVKNL DVRFHLGEGG LLRQSQGTIH ALSDIHFGLE QGQTVGLIGE SGSGKSTLGR 
AILHLVRPSA GAVYFKGTNL TALPEKQMRP FRQQMQMVFQ DPFDSMNARM TVGQIIMEPL 
LLQGIGTPGE RRRKAEALLE RMGLHRRAMN RYPGQYSGGQ RQRIAIARAL TTEPQLLVLD 
EPTSGLDVSM QARILNLLRD LQKEMGLSYV FISHDLGAVS YLAQNVIVLY LGRVVEIAPT 
PTLISSPAHP YTASLLDALP PMVRQGELPH LPEPVGEPPS PVNPPSGCAF HTRCPKAEAI 
CSSERPLLSS VGLGHQVACH FPLRDAYLSK GAIHAE