| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2974 |
|---|
| Symbol | |
|---|
| ID | 7135962 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | + |
|---|
| Start bp | 2663976 |
|---|
| End bp | 2665733 |
|---|
| Gene Length | 1758 bp |
|---|
| Protein Length | 585 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643531325 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002427341 |
|---|
| Protein GI | 218667257 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGAC TTCTGATCAA TGAACCATTC CGCCGGGCGC ACTCCGGGAT CTTATCCCGG
CTAATCGTCG TGGTGTGGAC CCTCGTAGCC CTTGGCGGCT GCGCATCCGT TATGCCCTAC
GGCAGACCAG GTACATCCTC ACCAACGACG ACATCCGTTT TGCCGCAACA TGTCCTTTTG
CCTCAGATCA AAAGGACCTA TCCGACCTTT CAGCCGAAGA TGCCGCCTCC TGCCCGGCAC
CTCTATGTGG CGAACATCAG CGCACTCCCG CCAGATCAAA AACGGCTGCT AGTGACGCTG
CAAGGCATTG TTAACCGCAC CCAGCCGCGG ATTTATCTCG TATGGGATCC GAGTGATCTG
TTCTGGCTGC GCCAGATGCA AAAACAAGGT CAAACCGGCA CGCCGATTCC GGTTAACCAA
CCTTTGTCGC TGGTACGGAT TTTCCGTAAT GACATACAGG GCGCGGTGAT TCCGGATCCG
AGGGTTTATA TTTCTCCGGA TATCGCCGTG GATATCGCGG CGCTGGACAA CCTGGTGGTG
GCCACGCCCG CCCTGGCGCG GCAACTGCAT TTGCCCATCA AGGCGGATTT GCGCGGGCGC
TTTAAGAATG ATGTGCAGGC CCTGCGGTAC CTGCGGACAC AACTGGCACC ACGGATGAAT
CCCTTTCTGT TTTTATGCCT GGCCCCCCAA CTTCTGGCTG GCGGCGCGGA AGATCAGATC
ATTGCCGCGC GCGGTATGAC GTTCTGGGTG ACTGGTCCCA AAGAGCAGCA AGAACCAGGA
GCGGATATGG CTGGAGAAAA ACAACAAATA GAAAAACTCT TTGCCGCCAC GCCGCTGGAT
GGGGTAGTGC GCGGTTGGTG GTGGAGTGGC GACGGAAAGG GCCTGGGAGA GGGCATTGGT
GTCAGGCTGG GCTCTGAGTT TGGGAAAGTC ACCGTAGTCA GCGACCATGT ACATAACCTT
TCCGTATTGA GCGGGGTAAG GCTGGTAGCG CTACGGCAGA AATTTGCCCC GCCCCCGAAA
CTGGATCGAT CCAAGGTGTA TCTCTCGTTC ACTATTTCTG ACGGCGACAA TCTGAATACT
TGGCAGAATT TTTTCTGGCA TTGGTTTAAG AGTCCGTATT ATGGCAAGTT CGCGGCCGGA
TGGGCCATGG GACCGACACT GATCGACGTG GCGCCCACGC TGGCGCAATG GTACTACCAG
CACGCCGGAT CGAATAATGA ATTTATAGCC GGTGTTTCCG GCGTCGGTTA TATGTACCCG
TCCGTCTGGG CGATTCGCTT GGATAATCGC CAAGCTGCAT TTCAGGATTT TTATAACTGG
ACATGGCGCT ACATGCAGCG GATGGATATG AAAACTCTCC GCGTGCATCG GGCCTTCGCA
CGAAATAACC AAATGGCTAG ACAGGATATC GCCAAAGTCG CGGCGGCGTT GCCGCAAGCG
CAATTTATAA TGCCGGATTA TGGCTACGCT GGTGAGAAGG ATTACCACCG GATCACATAC
CAGCTACCAA GTGGACAGGT AATTTTCCGG GCGGGCACTA GTTGGCAGCC AGATACCCAG
AAACTCCCTA ATCTAGTTCA ACAAATCCGC TCCCGTGTGG GGGCAACACG GCCGGCATTT
ATCAATGTCT TCATCTTGAA TTGGGCCATG GGCATGCATC GCCTGTACCT GCTTCTCAAA
GCGCTCGGCC CGGATTATGT GGATGTCACC CCCTCCCAGT TGAATACGCT TTATCGTGAG
GCACACCATG ATGGCTAA
|
|---|
| Protein sequence | MNRLLINEPF RRAHSGILSR LIVVVWTLVA LGGCASVMPY GRPGTSSPTT TSVLPQHVLL
PQIKRTYPTF QPKMPPPARH LYVANISALP PDQKRLLVTL QGIVNRTQPR IYLVWDPSDL
FWLRQMQKQG QTGTPIPVNQ PLSLVRIFRN DIQGAVIPDP RVYISPDIAV DIAALDNLVV
ATPALARQLH LPIKADLRGR FKNDVQALRY LRTQLAPRMN PFLFLCLAPQ LLAGGAEDQI
IAARGMTFWV TGPKEQQEPG ADMAGEKQQI EKLFAATPLD GVVRGWWWSG DGKGLGEGIG
VRLGSEFGKV TVVSDHVHNL SVLSGVRLVA LRQKFAPPPK LDRSKVYLSF TISDGDNLNT
WQNFFWHWFK SPYYGKFAAG WAMGPTLIDV APTLAQWYYQ HAGSNNEFIA GVSGVGYMYP
SVWAIRLDNR QAAFQDFYNW TWRYMQRMDM KTLRVHRAFA RNNQMARQDI AKVAAALPQA
QFIMPDYGYA GEKDYHRITY QLPSGQVIFR AGTSWQPDTQ KLPNLVQQIR SRVGATRPAF
INVFILNWAM GMHRLYLLLK ALGPDYVDVT PSQLNTLYRE AHHDG
|
|---|
| |