Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2967 |
Symbol | |
ID | 7135422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 2650455 |
End bp | 2656202 |
Gene Length | 5748 bp |
Protein Length | 1915 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643531318 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_002427334 |
Protein GI | 218665432 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAATCG TCATCGACTT GCAAGGCGCA CAAACACCTG GGAGCCGAAA TCGCGGTATC GGGCGTTATT CCCTATCTCT GGCTCTGGCA ATCGCTAGAC AAGGTGGGGA GCATGAAATT CTCATCATGC TAAATGGTGC GTTTCCTGAC ACGATAGATC CAATACGCCA GGCTTTCAAT GGCCTGATTC CAACCGATAA TTTCAGAATT TTATACGGAT TATATCCCTC GCGCGCTATT GATGCAGACA ACCGATGGAG GCGTCAAGCA TCTGAAAAAC TTTATGAATC GTTCATGTTG CAAATTGATC CGGATATTCT GTTGGTTAGC AGCCTATTCG AAGGTTTTCA TGAAGATGCC ATTACCAGCG TTAATAGCCA AGGCAAATAT GCGGTTGCTG TTATTCTTTA CGACCTAATT CTCTTAATTC ATCCCAAACC TTATCTAGAG AACCCTAGTG TTTCGGCTTG GTATCATGCT CGCCTTGACC ATCTTCGACG GGCTGATATC TTGCTTGCTA TATCCGAGTC TTCTCGTCAG GAGGCTATAA AATACCTAGA TGTTGAAGAC GGACAAGCGG TCAATATTTC CTGCTCAATA GATGGCTATT ACCGTCCGTT GTCGTTTTCT CTGGAGGAAC GGCGGCACAT AATGGAGCGA TACTATCTGA CCCGGCCATT CGTCATGTAT ACCGGTGGAA TAGACTATCG GAAGAACATC GAAGCACTAA TTAGTGCATA TGCAAAACTG TCTAACGAGA TTCGCCGTGG CCATCAATTG GCTATTGTCT GTTCGATTCT GGATCATGAT CGGAACCGTC TGGAAAAGCT CGCGCAAAAA TGTGGCTTGG GTGCTGGGGA ATTGGTGTTC ACTGGTTTTA TCCCAAGCGA TGATCTCCTG GCGCTCTATA ATCTGTGTCG CCTGTTCGTT TTTCCATCGT GGCACGAAGG TTTTGGGTTG CCGGTGTTGG AAGCTATGGC CTGTGGTGCG CCAACGTTGG CCTCCAATTG CAGCAGTTTG CCTGAGGTGG TCGGGCTGGA CGAGGCTCTA TTCGATCCCA AGGATGAGCA CGCTATCGTA GATGCTATGG AGCGCGCTCT GACGAATGAT GCGTTTCTCC AAAGACTTAA GGCGCACGGG TTGCAGCAGG CTAAAAAGTT TTCATGGGAC GCTAGCGCCC AACGTGCGTT ACAGGCAATG GAAACGCGGG TCAGCATGGC TAAATCCAGT CGGGCGGCTA CACCGCCACT GGCGAAAATA CCTCGCAAGC GACTGCGACT AGCCTATGTC TCGCCGTTGC CTCCTGCACA AACTGGTATT GCTGACTACA GTGCTGAATT GTTGCCAGAA TTGTCCCGCT ACTATGTCAT TGATGTCATC GTTGCCCAGC AAGAGCCGGT GACTGATCCT TGGGTTCTGG CTAATGCCGC TCAGCGCATG GCTGCGTGGT TTGACCAGCA TGCTGGCGAA TATGACCGCA TCCTCTATCA ATTCGGTAAC TCGCAATTTC ACCAACACAT GTTCGGCCTG CTGGAAAAAC ATCCTGGTGT GGTAGTGCTG CACGATTTTT TCCTCAGTGG TGCTTTGGTG CATATGGATT TACACGGAAT CATGCCGGGG ATTTGGGCGC AGGCCTTGCA ACGTTCCCAT GGCTGGCAGG CGGTTTGCGA ACGCTACTCA GAGACAGACA CCGCCGCAGT GATTTTCCGA TACCCCTGCA ACCTAGACGT TTTGCAACGT GCCCAAGGCG TTATCTGCCA TTCGGATTTT TCCCGTCGGC TAGCCATGCA GTGGTATGGG CCGGGCTGGG CGGATGACTG GGCCTTGGTT CCCCTTTTGC GCGTGCCAGT TGTGGATAAC CGACGCCAGG AGGCGCGCGA TGAGTTAGGC CTAGATGACC GCGACGTTCT AGTCTGTAGT TTCGGCCTCA TGGGAAAAAG CAAACTTAAC CATCGCTTGC TCGAAGCGTG GCAGGCGTCC AGTCTGGCAA AAGACAAACG CTGCAAGCTA GTGTTCATCG GTTTTCTACC GATGGATGAC TACGGCGAGC AAATCCGGCA GGTACTAAAG GCGCCGGGGT TGCGTGGGCG GGTGCATGTG ACTGGTTGGG CTGATGCGGC TACCTATCGT CGCTATCTAG CTGCGGCCGA TCTTGCTGTG CAATTACGTA CCCTATCGAG GGGGGAGACT TCCGGCACGG CGTTAGACTG CATGAATCAC AGTGTGGCTA CCATAGTAAA CGCCAATGGT TCGATGACAG ACTTGCCAGC GGACGTGGTG CATGTGCTTC CTGATGAGTT TTCCACCCAG CATCTCGTTG ACGCACTTGA TTTTCTGCGC AAGAACAAAC CTGCGCGTCA AGCTTTGGGT CAGCGGGCAG CGCAGCACGT TCGAGCATAC CACAACCCCC GACGCTGCGC TGACCAATAC GCACAGGCCA TTGAGGAGTT TTACCTTCGC GCGGAATCGG GCGCATCGGG CATCATCAAA GCCGTCCGAC AGCTCGGTAT GCCCGAAAAT GTTCAAGATA TTACACAGGT TGCTGAACGC TCTGTGCAGC TTTTTCCCCC GCCCCGACCT GCCCAAAAAC AGTTACTCGT GGATGTGTCA AGCCTTGTGC AAGGCGGCGT CGATAGTGAG TGGGACTATG GCGCCACCAG GTTGGTATTA CAGGAGCTGC TGAATCATCC CCCACCCGAT TTGCGGGTAG AACCGGTGTA TATCACAGCC GAACATGGCT ACCGTTACGC GCGGCGCGCC ACCATGCGTT TTCTAGGATA TCCCGATGGT GACCTGCAGG ACGATGTGAT GGAGGTCTGG CCTGGGGATG TGTTTTTTGG CCTAGATTTT CAGCTTGAAA TGGTTCCTAT GCAGGCAAAA TTCTTTGAAG AGATCCGCTA TCGTGGCGCT CAGGTGTTTT TCCTGTGCTA CGATCTACTA CCATGCATGG CGCCACAATA TTTCCTCCCG GATAGGTCTG CGGCCCACTT TCGCTGGTTA CAGACTATCG CAATAACCGA TGGAGTGATA TGTACCTCAC GAGCGGTAGC CGATCAATTT TCTCATTGGT TAGATTTATT TGGCCCTGAA CGAAGCACAC CATTGCACCT CGGCTGGGCC CATATTGGCT TTGAAGTCAT CCAAAAGATG AAGGAGTTAG ACACAGCCTA TAGGTACCGG CACGTTCTCG ATAAAGTTCG CGCCCGACCA AGTTTTCTCA GCGTTACCAC ATTGGAGCCA AGCAAACAAC TGGGGCAAGT TTTGACCGCT TTTGATCTTC TATGGCGGCA GGGTATGGAT GTCAATCTGG TTCTGGTAGG TAAGTATCGC TCGGAGGGAG AGAATATGGT TGCACGCCTA CAAACCCACC CAGAGCGGGA AAGCCGCCTG TTCTGGCTGC AGGACATCAG CGGTGATAGG CTGGATCATA TGTACGCCGC AAGCGCCTGC CTGATTGCCG CTTCGGTCGA TGAAAGCTTT GGGTTGACCC TAATTGAGGC TGCACAGCAC AAGTTACCCA TCCTGGCACG GGACACTCCC GTATTTCGCG AGATGGCAGG TGAGTATGCC GACTATTTTA GTGGAGATGC GCCACAGCAC TTGGCGGAAG CCATTAGGCA CTGGCTACAG GCCCATAAGA GCGGTAGTGG CACACAGGCC CATCTTATTG TTCCTAGACT GACCCAGCAG AAAAGCACTC AGAACCTCAT GGAAGTTATG CTAGGTGGAA ATTGGTATAG GCAATGGTTC CGGCAAACAG ACCCACGTCT GGTTGCCCGC TACTGGGGCT CGGACTGGCG CCTAGGCAGC GCGGTCGGGG AAATATGCGG CACCTCCCGC CAGAGCAAGG GAGTGGCGGG GTACTTGCTT CATGGGCCAT ATATTTCCCT GAAACCGGGC AGGTATGTTG CCACTATCCA CGGAACCCAC GGTTTTGGGG GTCCGGCAGG TGCCAGGGCC GATGTGGTAA TAAAAGGTGG TACCATGAAG ATCGCGGAAG AAGTCATACT TGCTTGTGAT TATGTGGAAG CCAAACAGCA GCCTTTAGTT ACCCTGCCCT TCATTCTGGC GGATGGCTGC AGCGACTTGG AAGTACGGGT ACATGTCGAA CAGGAGAGTG ATATACAGGT GACCATGTTG GAACTCCATA AACAGGACGG AGCTGTCCAA ATCGCTACTT CGCAAAACAA TGCCACAACA GAAATGCCTT TCGCCAGCTC CATTGGTACC GATTTCACTT CCCCAACCGC CGTTGTATAC CGTTACTGGG CAACACATCC GTGTTTGTCG AGCCAAGTAG GGCAGAAAGT TGGTCGCACG CTTTGGACTT TGGGCAAGGC AGGTGTTCTG GTGCATGGCC CCTATATTAG TTTGCCTGCC GGGACCTATC GCGCCGCAGT ATTCGGTCAG GTCAACCGCC CAGGAAGCTT GGATGGGGCG TGGATGGACG CCACTGCGCA GAAAGGCGAA CTGCAGCTTG TGAAAACTAC GTTGGGTACA AACGCACAGT GCCCCGCTCT GCTGGGAGAA ATCACCTTCA GCTTGAACCG TTACACCAAA GATGTGGAGG TTCGGGTGTG GGTGGACACG GGCTCCGACT TGCATGTGAC TGGGATCCAG ATCGAACAAA TCCCCGATGA AGCATGTGCT ACTGAGCCTG CGACCAAGGG CGGGCCAGAT GGGGCGGATA TAAGGCCTGT TAAACAGGTA ACCGATGTGC GGGCACCTGT GATGGAAATC CATAAACTGG ATGTGGTTTC CCCACTAACC ACTTTGCAAT GCTCTCTAAA ACCAAGGGTT CAATTTACTG AAGACGTGCA CTATTACAAG GCGACGCATC CACATCTGCA TTCTGAAGTA GGGCGGAAGG TTGGCCGCAC GTTGCTAACG CAAGGCAAGG CAGGTTTCCT TTTGCGTGGG CCATACATTG GCTTGCCTGC CAGACGCTAT CGCGCAGAGC TATTTGGTAA CATTACAGGG CCTGGTGGTT TGAACGGATC ATGGATGGAT GCTGCGGCGC AGCAGGGCAG GTTGCAACTT GCGAGGGAGC CGTTAGCGGA GGATGCGTGG CGAACCGGTT TGCTTGGGGA GATCACCTTC ACGTTGAATA GCGACATTGA AGATGTAGAG GTTCGAGTAT GGGTGGATGC GGCCTCGGAA TTGCTAGTGA GCGGAATCCA AATCACCCCA TCGCCTGATC CGGCGGATAC AACGGGGCCA ATGACGGAGG CGACCGTCGT AATGTCGATT CAAGGGGATG TGACTGCTTT ACATACCGAA GAGACGACGG AGGAATATGG GGAAGAGCTA ACACAGGAGG CGCCGGGCGA ATCGATCACT ATGAACACCG CAGAAATAGC GGATGCAGTC TGGGAAAAGA CTAATGTGGT TGATGCTGCC GATGCCGACG CCCTGTACCA GCAATCTGGT GCAGAATACG CCAGAATTAG GGGTGTGATG AAAGGTAAAG ATATCGGAGA GCAGGTAGGA CACCCATTTT CACCGATGAT AACCGCCCTT GGCTCGGCGC AGAAGCTATC TATGGAGACG AATGGGCACG CTGAGGATGG GTCTAGCGAA ACTAAAGCAG TAGTGGCATT TGCAGAAAAT GCTCGGGACA AGGAATCGGA GGAACCGCGT GGCGGCGCGC ATGTACCACA AGCCTCACAT CGGACAGATC GGAAAGACAG CATCGTGAAA ACGCGATATG CCACGAAAAA AAATGTAAAA CACAGAAAAT TTAAATAA
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Protein sequence | MRIVIDLQGA QTPGSRNRGI GRYSLSLALA IARQGGEHEI LIMLNGAFPD TIDPIRQAFN GLIPTDNFRI LYGLYPSRAI DADNRWRRQA SEKLYESFML QIDPDILLVS SLFEGFHEDA ITSVNSQGKY AVAVILYDLI LLIHPKPYLE NPSVSAWYHA RLDHLRRADI LLAISESSRQ EAIKYLDVED GQAVNISCSI DGYYRPLSFS LEERRHIMER YYLTRPFVMY TGGIDYRKNI EALISAYAKL SNEIRRGHQL AIVCSILDHD RNRLEKLAQK CGLGAGELVF TGFIPSDDLL ALYNLCRLFV FPSWHEGFGL PVLEAMACGA PTLASNCSSL PEVVGLDEAL FDPKDEHAIV DAMERALTND AFLQRLKAHG LQQAKKFSWD ASAQRALQAM ETRVSMAKSS RAATPPLAKI PRKRLRLAYV SPLPPAQTGI ADYSAELLPE LSRYYVIDVI VAQQEPVTDP WVLANAAQRM AAWFDQHAGE YDRILYQFGN SQFHQHMFGL LEKHPGVVVL HDFFLSGALV HMDLHGIMPG IWAQALQRSH GWQAVCERYS ETDTAAVIFR YPCNLDVLQR AQGVICHSDF SRRLAMQWYG PGWADDWALV PLLRVPVVDN RRQEARDELG LDDRDVLVCS FGLMGKSKLN HRLLEAWQAS SLAKDKRCKL VFIGFLPMDD YGEQIRQVLK APGLRGRVHV TGWADAATYR RYLAAADLAV QLRTLSRGET SGTALDCMNH SVATIVNANG SMTDLPADVV HVLPDEFSTQ HLVDALDFLR KNKPARQALG QRAAQHVRAY HNPRRCADQY AQAIEEFYLR AESGASGIIK AVRQLGMPEN VQDITQVAER SVQLFPPPRP AQKQLLVDVS SLVQGGVDSE WDYGATRLVL QELLNHPPPD LRVEPVYITA EHGYRYARRA TMRFLGYPDG DLQDDVMEVW PGDVFFGLDF QLEMVPMQAK FFEEIRYRGA QVFFLCYDLL PCMAPQYFLP DRSAAHFRWL QTIAITDGVI CTSRAVADQF SHWLDLFGPE RSTPLHLGWA HIGFEVIQKM KELDTAYRYR HVLDKVRARP SFLSVTTLEP SKQLGQVLTA FDLLWRQGMD VNLVLVGKYR SEGENMVARL QTHPERESRL FWLQDISGDR LDHMYAASAC LIAASVDESF GLTLIEAAQH KLPILARDTP VFREMAGEYA DYFSGDAPQH LAEAIRHWLQ AHKSGSGTQA HLIVPRLTQQ KSTQNLMEVM LGGNWYRQWF RQTDPRLVAR YWGSDWRLGS AVGEICGTSR QSKGVAGYLL HGPYISLKPG RYVATIHGTH GFGGPAGARA DVVIKGGTMK IAEEVILACD YVEAKQQPLV TLPFILADGC SDLEVRVHVE QESDIQVTML ELHKQDGAVQ IATSQNNATT EMPFASSIGT DFTSPTAVVY RYWATHPCLS SQVGQKVGRT LWTLGKAGVL VHGPYISLPA GTYRAAVFGQ VNRPGSLDGA WMDATAQKGE LQLVKTTLGT NAQCPALLGE ITFSLNRYTK DVEVRVWVDT GSDLHVTGIQ IEQIPDEACA TEPATKGGPD GADIRPVKQV TDVRAPVMEI HKLDVVSPLT TLQCSLKPRV QFTEDVHYYK ATHPHLHSEV GRKVGRTLLT QGKAGFLLRG PYIGLPARRY RAELFGNITG PGGLNGSWMD AAAQQGRLQL AREPLAEDAW RTGLLGEITF TLNSDIEDVE VRVWVDAASE LLVSGIQITP SPDPADTTGP MTEATVVMSI QGDVTALHTE ETTEEYGEEL TQEAPGESIT MNTAEIADAV WEKTNVVDAA DADALYQQSG AEYARIRGVM KGKDIGEQVG HPFSPMITAL GSAQKLSMET NGHAEDGSSE TKAVVAFAEN ARDKESEEPR GGAHVPQASH RTDRKDSIVK TRYATKKNVK HRKFK
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