Gene AFE_2963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_2963 
SymbolctrD 
ID7135915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp2648246 
End bp2648899 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content50% 
IMG OID643531314 
Productcapsule polysaccharide exporter, ATP-binding protein 
Protein accessionYP_002427330 
Protein GI218666896 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.382388 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAGC TTTGTGAAGT GACCAAGACC TACCCTATCT ATCATGGCCA TGCGCAACGG 
ACCATTTTGG ATAGGATAAA TTTGCGTGTA GGGAAGGGCC AAAAATGGGG CATCCTCGGG
CGGAACGGGG CGGGTAAATC GACGCTTATC CGACTCATCA GTGGTGCAGA AAGGCCTAAT
ACCGGCAATA TCGTCAGAAA CATGACCGTA TCCTGGCCCT TGGCTTTTGG TGGAGCTTTT
CAGGGCAGCC TCACGGGGCG GGACAATACC CGCCTCATTT GCCGAGCTTA CGGGGTGGAT
TTTGATAAAA CCATAACTAT GGTGGAAAAC TTCGCAGAGC TTGGTAGTTA TCTGTGGGAA
CCGGTTAAAT CTTATTCATC TGGCATGTCG GCACGACTAG CCTTTGCTAT CTCCATATCT
GTGGAGTTTG ATTGTTTTCT CATCGATGAG GCGCTGGCCG TTGGTGATCA CCGGTTCCTC
CAGAAATGTA ATGTAGAATT ATTTGAAAAT CGTGGCGATC GCGCCATGAT CATCGTCTCC
CATCAGACAA ATATTATCCG GACCCACTGT GATCATGCCG CCGTATTGGA AAATGGCCAT
CTGACGGTAC ATGAAAGCGT GGATTCTGCC ATTGCTGCGT ACGAGGCGCT CTGA
 
Protein sequence
MIELCEVTKT YPIYHGHAQR TILDRINLRV GKGQKWGILG RNGAGKSTLI RLISGAERPN 
TGNIVRNMTV SWPLAFGGAF QGSLTGRDNT RLICRAYGVD FDKTITMVEN FAELGSYLWE
PVKSYSSGMS ARLAFAISIS VEFDCFLIDE ALAVGDHRFL QKCNVELFEN RGDRAMIIVS
HQTNIIRTHC DHAAVLENGH LTVHESVDSA IAAYEAL