Gene AFE_2962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_2962 
SymbolctrC 
ID7135131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp2647404 
End bp2648249 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content51% 
IMG OID643531313 
Productcapsule polysaccharide exporter, inner-membrane protein CtrC 
Protein accessionYP_002427329 
Protein GI218665543 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.619605 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCCACGC TAAACAAAAC GACAAAACCC GGCGAACAGG CCGGGCCTCG TTGGCACCAG 
AAGGAACCCA CGTTCTGGGA AGGCATTGCC ATCCAACGAA GGGTGATCTG GGCGCTTATT
CTACGCGAGA CGGTTACCCG TTATGGACGA GAGAATCTGG GGATGTTGTG GTTTTTCGCC
GAACCACTGC TGTTTATCGT TGGTATCACA CTTTTATGGA GCTACATCGA ACCCAGGTCC
GTTCCAGCCG GAACGGTGGC CGCTTTTGCG GTGGTCAGTT ATCCGACCGT TTTGCTCTGG
CGTAACACCG CGAATAGGGT GACAAAGGCT ATTGAAGTGA ATCAAGCACT TTTGCATCAC
CGCCCCATTC GGGCACAGGA TTTTTTCTAC TCCAGGATAT TGCTGGAGTT CGCGAGCGCA
ACAGGTTCCT TCTTGGTGAT ATTCATACTT TTTGTAGCGG TGGGCATATC CCATTTCCCT
GCCAATCTCT TCGACATGGT CATGGGCTGG CTCATGGTGG CCTGGTTCGC CTTCGGCTTC
GTCTTGACGA TGGGCGGACT GTCGGAAGTC AGCGAGGTGG TGGAAAAAGT GTCCCACATT
ATCTTGTATC TCATGCTGCC GTTTTCTGGC GGCTTTTTCC CCGCTTATAT TGTTCCCGAA
CCCATGCGGA ATTATCTTTT GCTTTTTCCT CTGGCGGATT GTGTGGAGTT TTTCCGATAT
GGGTACTACG GAGACTCATT CCCCTGTTAT TACCACCTGG GGTACACCAT TATCTGCAAC
CTGGCATTGA CGCTCTTCGG TTTAGCCATG ATGACCTATG CCATTCGTAA AGTAGAAGCG
ACATGA
 
Protein sequence
MPTLNKTTKP GEQAGPRWHQ KEPTFWEGIA IQRRVIWALI LRETVTRYGR ENLGMLWFFA 
EPLLFIVGIT LLWSYIEPRS VPAGTVAAFA VVSYPTVLLW RNTANRVTKA IEVNQALLHH
RPIRAQDFFY SRILLEFASA TGSFLVIFIL FVAVGISHFP ANLFDMVMGW LMVAWFAFGF
VLTMGGLSEV SEVVEKVSHI ILYLMLPFSG GFFPAYIVPE PMRNYLLLFP LADCVEFFRY
GYYGDSFPCY YHLGYTIICN LALTLFGLAM MTYAIRKVEA T