Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2954 |
Symbol | |
ID | 7135093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 2638293 |
End bp | 2639783 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643531305 |
Product | ribonuclease, Rne/Rng family |
Protein accession | YP_002427321 |
Protein GI | 218667189 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1530] Ribonucleases G and E |
TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGAAG AACTGCTGAT CAACGTCACC CCCCAGGAAA TCCGTGTCGC GCTGGTGGAC AACGGCGTCC TTCAGGAACT CCAGGTCGAA CGTAGCGGCC ACCGCGGTCT GGTGGGCAAC ATCTATAAAG GCGTCGTCCG CCGCGTCCTG CCCGGCATGC AGGCTGCGTT CGTCGATGTG GGTCTGGAAC GCACAGCCTT CCTCCACGCT GCGGATATTC AGGATGACAG CGAGGAGATC CAGGGCGAAA CCGATATCGA GCCTCGTGCC GGGCACCACG AGGTCCGCAA CGTCTGCGCC CTGCTCCGCG AAGGACAGGA AGTGCTGGTG CAGGTCATCA AGGACCCCGT CGGCAGCAAA GGCGCGCGAC TCTCCACCCG CATCACCCTG CCGGGACGTT ATCTGGTCTA CATGCCCTTC GTGCCACGCA TCGGCGTCTC CACCCGTATC GAATCACCGG AAGAACGGAT GCGGCTCAAG GAGCAGCTCA AATCTGTGAT CCCCCCCGAA GAGGGCGGTG GCTACATCAT CCGCACCCTC GCGGAAGGCG TGACAGAAAC CGACTTCTCC GGAGATATCG ATTTTCTCCG GCGCCTGTGG GACTCCATCC GCGCCCGGCT GGAGCGCAGC CCGGCGCCCG GCCAGATTCA CAGCGACCTC AATCTGGCCT TACGCATGAT GCGCGATGTC ATGTCCGACA ATATCCAGCG GGTGCGCATC GATTCACGGG AAACGGTCGA TGCCGCTCTG ACCTTCTGTC AGGGCGTCAT CCCGGAAGTG GCCGATCGCA TCGAACACTA CAGCGGCGAA CGTCCGCTCT TCGATCTCTA CAACGTTGAG GACGAGATCG AGCGCGCCCT GCAAAGCCGG GTCACCCTCA AGTCCGGCGC CTACCTCATC ATCGACCAGA CGGAGGCCCT GACCACGGTG GACGTCAATA CCGGCGGCTT CGTGGGGCGG CGCAATCAGG AAGAGACCAT CTTCAAGACC AATCTGGAGG CCGCCGCCGC CATCGCCCGG CAGATGCGTC TGCGCAACAT CGGCGGCATG ATCATCATCG ACTTCATCGA CATGGAGGAC GAAGAACATA AACGTCGGGT CCAGCGCGCC CTGGAAAAAA GCATCCAGAG TGACCGCACT CGCTGCAATA TCACCCAGAT ATCCTCGCTC GGCCTGGTGG AGATGACCCG TAAACGCACC CGCGAAAGTC TCCGCCAGAC CCTCTGCGAG CCCTGCCCCT ATTGCCACGG CCGCGGCTTC ATGAAAACCG CCGAAACCAT CTGCTACGAA ATCCTCCGCG AGATCGTCCG CGAAACCCGC GCCTACCCCG CCGAACGCTT TGTGGTTCTG GCTTCACCGC AGGTCATGGA GAAGCTGTTG GACGAAGAAA GCACCAGTCT GGCGGCGCTG GAGGAATTTA TCGGCCGCCC CATCAAGGTG CAGGCGGAGG CGACCTATAC CCAGGAGCAG TACGACATCA TCCTGATGTA A
|
Protein sequence | MSEELLINVT PQEIRVALVD NGVLQELQVE RSGHRGLVGN IYKGVVRRVL PGMQAAFVDV GLERTAFLHA ADIQDDSEEI QGETDIEPRA GHHEVRNVCA LLREGQEVLV QVIKDPVGSK GARLSTRITL PGRYLVYMPF VPRIGVSTRI ESPEERMRLK EQLKSVIPPE EGGGYIIRTL AEGVTETDFS GDIDFLRRLW DSIRARLERS PAPGQIHSDL NLALRMMRDV MSDNIQRVRI DSRETVDAAL TFCQGVIPEV ADRIEHYSGE RPLFDLYNVE DEIERALQSR VTLKSGAYLI IDQTEALTTV DVNTGGFVGR RNQEETIFKT NLEAAAAIAR QMRLRNIGGM IIIDFIDMED EEHKRRVQRA LEKSIQSDRT RCNITQISSL GLVEMTRKRT RESLRQTLCE PCPYCHGRGF MKTAETICYE ILREIVRETR AYPAERFVVL ASPQVMEKLL DEESTSLAAL EEFIGRPIKV QAEATYTQEQ YDIILM
|
| |