| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2948 |
|---|
| Symbol | nadD |
|---|
| ID | 7135904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | + |
|---|
| Start bp | 2634873 |
|---|
| End bp | 2635529 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643531299 |
|---|
| Product | nicotinate (nicotinamide) nucleotide adenylyltransferase |
|---|
| Protein accession | YP_002427315 |
|---|
| Protein GI | 218667756 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1057] Nicotinic acid mononucleotide adenylyltransferase |
|---|
| TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain
[TIGR00482] nicotinate (nicotinamide) nucleotide adenylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATAGTT CCACACACGA TGATCTGGTC ATCCTCGGCG GCACCTTCGA CCCCATCCAT
TACGGGCACC TGCGCGCCGT GGAGGAGGTG CGCCAGGCCC TCGCCATCGC GCAGGCGATG
CTGATTCCGG CGGGGCACCC GCCCCACCGC AAAAGCCCCT GGGCCGACGC CCGCCACCGT
CTGGCCATGA CCCGCATCGC CGTCGCGCAC CATCCGCAAT TCACGGTCAG TTCCTGGGAA
GTAGAGCGGG AGGGGCCGTC CTACACCGTG GATACCCTCA CCGCCCTGCG TCAGCAACGC
CCGGATGCGG TACTCGCCAT GGTCATCGGC ATGGATGCCT TTCTGCGCTT CGACACCTGG
CACCACTGGC AGCACATTCT GGACCTCACC CACCTCGTCG TTACCGGGCG CCCGGGCTGG
CCTGCCGCCG AATTACCGGA AGCCCTGCGC CAGGCCCTCT ATCAGCGCCG TTGCGAAGAT
GTCGACGCCC TGCGCCAGAC GCCCGCCGGC TGTATCCTGT TTCATACGGT CACCGCCCTG
GAAATCTCCG CCAGCAATAT CCGCAGCCTG CTCGCCGGTC ATCAGAGCCC GCGCTTTCTG
TTACCGGACG AGGTATTGGA TTATATTGAT GCCGAAGGGC TCTATCAGAG CCCATAG
|
|---|
| Protein sequence | MHSSTHDDLV ILGGTFDPIH YGHLRAVEEV RQALAIAQAM LIPAGHPPHR KSPWADARHR
LAMTRIAVAH HPQFTVSSWE VEREGPSYTV DTLTALRQQR PDAVLAMVIG MDAFLRFDTW
HHWQHILDLT HLVVTGRPGW PAAELPEALR QALYQRRCED VDALRQTPAG CILFHTVTAL
EISASNIRSL LAGHQSPRFL LPDEVLDYID AEGLYQSP
|
|---|
| |