Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2932 |
Symbol | recB |
ID | 7135613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 2614232 |
End bp | 2617828 |
Gene Length | 3597 bp |
Protein Length | 1198 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643531284 |
Product | exodeoxyribonuclease V, beta subunit |
Protein accession | YP_002427300 |
Protein GI | 218666658 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACCA TCCTCGACCC CCTGCACCTG CCCCTGCACG GCAGCCGCCT CATCGAGGCC AGCGCCGGCA CCGGCAAAAC CTGGACCATC GCCGCCCTCT ATCTGCGCAT GATCCTTGGA CACGGCAGCG AAGGTGAACA TTTTCCCCGC CCCCTCCTGC CCGAAGATAT TCTGGTGATG ACCTTCACCC GCGCCGCCAC CCAGGAACTC AAGGAGCGTA TCCGCGATCG CCTGCAAACG GCTGCCCGAT ATTTCCGCGG CACCGAACAC CCAGCGCAGC CGGATCCCTT TCTCGAAGCG CTGCTGGCCG ACCATCCCGA CCCCGAGGTC CGCGCCCGCG CCGCACACCA GCTTACCTTG GCGGCCGATG CCATGGATGA CAGCGCCATT TTTACCATCG ACGCCTGGTG CCAGCGCACC CTGCGCGAGC ACGCCTTCGC CACTGGCAGC GATTTCCGCG AAACCCTGCT CCTGGATGAG ACCGACCTGC GCGACGATGC CGTACGCGAC TTCTGGCGGC AGGAAATCTA CCCGCTGGGC GAACCCGCCC TCGATGAGGT CCTCCAGCTC TTTTCCGGCC CCGATAAGAT CCGGCAGGAG ACAGCAGCCC TGTGCAAACT CGATCCGCCC CTGCCCGCCC CCGCATCGAG GCTGGCGGAC TGGCTGCCCG ATGCCCTCGC CGCGCCCCGA CGGCGACTCG CCACCCTCAA GGCGCAATGG GCGGCGGAGC ATGATGCCTT TGCGGAGTGG CTGTCAGGGC TCGTAAACGG TCCCAAGGCA GACAATCCAT TGAATGGTAA TACCCTAAGC GCAGCTATTG TCAGTCGGGC CCTCGCCGCA TTGCGTGATT GGGCCGACCG TTCCGATCCA TTGATTCCCG ACGAACTGGA TAAATGCCAG CGCCTTTCTG CCAGCAAACT GCCCGAGTAT TGCAAAAACA AACCGCCTCC CGTCCTCCAC CCCGCTGCCG AGACACTGGA TACCCTGTTC AGGGAGTTGG AGACCATCGC TCAACAGTTC ACCCGACTGC ACGGTGAAAT TCGCACCCAC GCCGCCGCCT GGATCAACGC CCGGCTGAGT CGGCTCAAGG CCCAGAGCGG ACAGGTCAGC TTTGCCGACT ATCAGCGGCG CCTCGCCAGG GTACTGCACG ACAAAACCCA GGGACCGGCA CTCGCCGCCC GCCTGCGGCA GAAATATCCC GCCGCCCTCA TCGACGAGTT TCAGGATACC TCCGCCCTGC AATATCAGAT CTTCGACGAC ATCTACCACG CCGCCGACAA CAACCCCGAC ACTTTGCTTC TGCTCATCGG TGACCCCAAA CAGTCCATCT ACGCCTTTCG CGGCGCGGAC ATCGACAGTT ATCTGCAGGC ACGTCGCCTG ACCGAGGGCC GCCATTACGC CCTCGGCACC AATTATCGCT CCAGCCACGC GCTGGTCAGC GCCCTCAACG CCATCTACAC CGCCGCCGAA CACGACGACC CGCAAGGCGC TTTTGCCTAT GCCGCCCCCG GTGCCGACAA CCCGCTCCCT TACCAGCCGG TGCAGGCCCA TGGCCACCAG AAAGTCTGGC GGATCCATGG CAAAGCCGCC CCCGCCCTGA CGTTCTGGGG TGCCGGCGAG AAGCTGAACA AAGGCGACTA TCTGGAACGC TGCGCAGCAC AGGCCGCAGA ATGTATTGTC GGACTGCTCG ACAATCCGGA AGCAGGATTC GCGCAGGAGG GAGAAATCAC CCGACGGCTG GAGGCCAAGG ACATCGCCAT TCTCGTCCGC GATCGTCATG AAGCCGCCAG CATCCGTCAG GCCCTCCACC ACCGCCAGTT ACGCAGCGTC TTTCTCTCGG AGCAGGATTC CGTCTATGCC AGTGAGGAAG CCCGCGAACT GCTTCTCTGG CTGGAGGCGG TGGCCGAACC CGAAGATGCC CGCCGTCTGC GCGTCGCCCT CGCCCTGCCG CTGCTGGGAC AACCCCTCAG CGCCCTGGAT GCCTTTCATC AGAACGAAAC GGCCTGGGAG GCGCAACTGG AGCAGTTTCA GGATCTGTCC CGGCAATGGC GGCGGCAGGG CGTGCTGGCC ATGCTCCACC ACAGCATCCA TCAGTTCGGC ATTGCCGCCC GCCTGCTGAC GCAGCCCGAG GGCGAACGTC GCCTCACCAA CCTGCTCCAT CTCGGCGAAC TCTTGCAGCA GGCGAGCGCC ACCATCGACG GCCCCGAGGC CCTCGTTCGC CACCTGCATC AGGCCATCGC CGCCGGAAGT GATCAGAGCG ATGCCCACAT CCTGCGTCTG GAGAGCGATG CCGGACTGCT GCGCGTGGTC ACCATCCACG CCGCCAAAGG TCTGCAATAT CCCCTGGTTT TTTTGCCCTT CATCGCCACC TGCAAGGCCG CCAGGGCCAA CCCCTTTACG GTCATCCACA GCGCGGAAGG ACAGCCCGCC ATCCACTGGG AAAGTGGCGA CACGACGGCG GCGGAAAGGG CACGGTTGCA GGAAGATCTC CGCCTCCTCT ACGTCGCCCT CACCCGTGCC GAGCACGCCC TCTGGCTGGG CCTCGCCGCA CCGAAGACGG CGGGAACACC GATCTTTGCC GGCAGTGCCA TCGCCCATCT GCTGGGTAGC GAACGCACCG CCCGCGATCT CGCCACCTTG CTCGAAGACT GCGCCCGCCT CTCTCCGGAG ATTGTCGTCG AGACGCTACC GGACAGCATC CCCACGACGC TGTTCGTGCG GCCCCGCAAC AACGCCCACA ACCCGCCCCC AGAGTACACC GCCAGCTTCG AGAAGCACTG GGGCGTTGCC AGCTTCTCCC ATCTGGTGCG CGAACTCCCT GCCGATCCGG CGGCGCCACC GACGCCCCGG CGCGCCCAGG CCGGCGCCCC CTGGCATCGC TACCCGCAAG GCATGAACGC CGGCACCTTT CTCCACGACC AACTGCAACG CCTCGCCCAG AATGGCTTTG CCCAAATCGG TCAGGACCAA TTTGTCGAAC AACTGCACAA GGCCTGTACC CAGGCCGGCC TGGGCGACTG GGTCGGGGAG ACCGCCGAAT GGCTGCAAGC CATCGTCCAT AGCCCCCTTG CCCCCCTCAC GGCGGCGCTC TGCGATCTCA GCGACACCCT GAGCGAAATG GCCTTCTGGT TTCCCAGCGA CGCCTTGCGC AGCGACGACC TGGACAGGCT CTGCCAACAG CATATTTTCC CCGGTGCCGA TCGCCCCAGG CTCCCCCAGC GGGTCATTCA CGGCATGATG CGCGGCTTCA TGGACCTCGT CTTCGAGCAA GGAGGGCGTT ACTACGTCCT CGATTACAAA TCCAACGTCC TCGGCAGCGA GGATGCCGAT TACCACGCCA AAGCGCTGCG CGACGCCACC CTCGGTCATC GCTACGAACT GCAATCCAGC CTCTACCAAC TGGCCCTGCA CCGCCTGCTG CGCCAGCGCA TGGGCAGCCG CTACCGGCCC GAGACCCATC TCGGCGGCAC CCTCTTCTTC TTCCTGCGCG GGCTGCAAGG ACCGGAGCGA GGCGTGCTCC ATCTTCCCGC CGACCTCGCC CTGCTCGATG CCCTCGACGG CCTCTTCGGC TGGCCGCAGC GGGCAACCCA GCCATGA
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Protein sequence | MTTILDPLHL PLHGSRLIEA SAGTGKTWTI AALYLRMILG HGSEGEHFPR PLLPEDILVM TFTRAATQEL KERIRDRLQT AARYFRGTEH PAQPDPFLEA LLADHPDPEV RARAAHQLTL AADAMDDSAI FTIDAWCQRT LREHAFATGS DFRETLLLDE TDLRDDAVRD FWRQEIYPLG EPALDEVLQL FSGPDKIRQE TAALCKLDPP LPAPASRLAD WLPDALAAPR RRLATLKAQW AAEHDAFAEW LSGLVNGPKA DNPLNGNTLS AAIVSRALAA LRDWADRSDP LIPDELDKCQ RLSASKLPEY CKNKPPPVLH PAAETLDTLF RELETIAQQF TRLHGEIRTH AAAWINARLS RLKAQSGQVS FADYQRRLAR VLHDKTQGPA LAARLRQKYP AALIDEFQDT SALQYQIFDD IYHAADNNPD TLLLLIGDPK QSIYAFRGAD IDSYLQARRL TEGRHYALGT NYRSSHALVS ALNAIYTAAE HDDPQGAFAY AAPGADNPLP YQPVQAHGHQ KVWRIHGKAA PALTFWGAGE KLNKGDYLER CAAQAAECIV GLLDNPEAGF AQEGEITRRL EAKDIAILVR DRHEAASIRQ ALHHRQLRSV FLSEQDSVYA SEEARELLLW LEAVAEPEDA RRLRVALALP LLGQPLSALD AFHQNETAWE AQLEQFQDLS RQWRRQGVLA MLHHSIHQFG IAARLLTQPE GERRLTNLLH LGELLQQASA TIDGPEALVR HLHQAIAAGS DQSDAHILRL ESDAGLLRVV TIHAAKGLQY PLVFLPFIAT CKAARANPFT VIHSAEGQPA IHWESGDTTA AERARLQEDL RLLYVALTRA EHALWLGLAA PKTAGTPIFA GSAIAHLLGS ERTARDLATL LEDCARLSPE IVVETLPDSI PTTLFVRPRN NAHNPPPEYT ASFEKHWGVA SFSHLVRELP ADPAAPPTPR RAQAGAPWHR YPQGMNAGTF LHDQLQRLAQ NGFAQIGQDQ FVEQLHKACT QAGLGDWVGE TAEWLQAIVH SPLAPLTAAL CDLSDTLSEM AFWFPSDALR SDDLDRLCQQ HIFPGADRPR LPQRVIHGMM RGFMDLVFEQ GGRYYVLDYK SNVLGSEDAD YHAKALRDAT LGHRYELQSS LYQLALHRLL RQRMGSRYRP ETHLGGTLFF FLRGLQGPER GVLHLPADLA LLDALDGLFG WPQRATQP
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