Gene AFE_2931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_2931 
SymbolrecC 
ID7134920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp2610843 
End bp2614235 
Gene Length3393 bp 
Protein Length1130 aa 
Translation table11 
GC content66% 
IMG OID643531283 
Productexodeoxyribonuclease V, gamma subunit 
Protein accessionYP_002427299 
Protein GI218667219 
COG category[L] Replication, recombination and repair 
COG ID[COG1330] Exonuclease V gamma subunit 
TIGRFAM ID[TIGR01450] exodeoxyribonuclease V, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCATC CGGAAATCGA ACCGGGCTTT ATCGTCCTCC ACGGCGACCG TCTGGAGTGG 
CTCAGCGATG CCGTTCTGGA GTGGCTGCGC GCGCACCCGC TTCGGCCACT GGAAGAGGAA
ATCTTCCTCG TCCAGAGCAA CGGCATCGCC GAGTGGCTGC AATGGACCCT GGCAGCCCAT
GAGGGCATCT GTGCCGCGGT GCGCGTCGCC CTGCCGGGGC GTTTTCTCTG GGAAAGCTAT
GCACGGGTGC TGGGCACCGG CATCGTCTCG GCCCGCTCGC CGCTGGACAA GGCACCGCTC
ACCTGGCGAC TGATGCGGCT CTTGCCGGAA CTGCTGGCCC ATGCCGATTT CGCCCCCTTG
CGGCATTTTA TCGGCCAGTC ACAGCGGCCG GACGGCGCAT TGGAGCGGCG CTGGCAAATG
GCCGCGCAGA TCGCCGATCT GTTCGACCAG TATCAGGTCT ATCGTGGCGA CTGGCTGGCG
GACTGGACCA CGGACCAGTC CCTGCTGCGG CGGGGCGATG GCGAGCGGGT GACTCTGCCC
GCCGACCAGC GCTGGCAACC CCGGCTCTGG CAGGCGTTAC GGCAGGATCT GCACAGCCGC
GGGCTGGACC AGGCTCCGGG CCGGGCGCAG GTGCATGAGC AATTTCTCGC CGCCCTGAAT
GCCGGGCGCC CCCCCGTAAC GCCCTTGCCC CGCCGCGTCG TCATCTTCGG AGCAGCCACC
CTGCCGGAAC AGAGTCTGAC CGCGCTGGCG GCGCTGGGCC GGCAGATGCA GGTGATCCTT
GCGGTGCCCA ACCCCTGCCG CTACCACTGG GCCGACATCG TCTCGGGGCG CGAATTGCTC
AGACGCGAAC GACGTCGCCA ACCCCCGCGC AACGGCCACG ATCTCTCCGC CACCGCCACA
GAGGACCTGC ATCAGTTCGG CAATCCCCTG CTCGCCGCCT GGGGCCGTCA GGGCCGGGAT
TTTCTCGATC TGCTGGACCA GTTCGATGAA ACGGCGGCAT TGCAGCGGCA GATGGACATC
CCGCGCATCG ATCTCTTCAG CGAAGATCAG GGCGACACCC TCCTGCGCCA GTTGCAGGTA
CAAATCCGCG ATCTGGAAGG TATCAGGCCG GAAACCTGCA CCGCACTGGA CGACAACGAT
CACTCCGTGG TCTTTCACAT CGCCCACAGC GCCCTGCGCG AGGTGCAGAT CCTCCACGAT
CAACTGCTGG ACCGCTTTGC CACTGGCAAA CTGCAGCCCC GCGACGTGAT CGTCATGGTC
CCGGAGATCG GCGGCTTTGC GCCCCTCATC CGCGCCACTT TCGATCAGTA TGACCGGGAG
GACAGGCGTT ACATTCCCTA CCACATCGTC GATCTGCAGG CCCGCGACGA ACAGCCCCTG
CTCCTGGCCC TGGACTGGCT GCTGCGGCTG CCCGAGCAGC GCTGCCGACA GAGCGAAATC
CGTGATCTCC TCAACTGCCC CGCCCTGCGC CGGCGCTTTG GTCTGGAACT GGAGGACCTG
CCCATCGTGC AACACTGGCT GGCCGGAGCC GGCTGGCGCT GGGGGCTCTC GGCAGAGCAC
CGGGCCGCGC TGGGCATGCC CCATTGCGGT TCCCAGAACA GCGGCGACTT TGCCCTGCAA
CGCCTCTGCC TCGGCTATGC CAGCGGCGAC GACAGCCATT TCTCCGGGAT CGAGGCCTAC
GGCGAGGTGG GTGGGTTGGA CGCCGCGCTC CTCGGCCCCC TCGGTCAATT GCTGGAGAAG
CTGGCGCACT GGCAGCACGT TCTGGGCGAA TCCCTGGTGC CGGAGCACTG GGGTGAAGCG
GCCCGCAATC TGCTCACGGA CTTTTTCAGC GCCAGCGATG ACGACGATGA AGCCCTCCTG
CAAAATCTGG AAGAGGCCCT GCGCCAATGG CAGACGGATT GCGCGGCGGC AGATTTTAAC
GAAGCGCTCC CCCTCGCGGT ATTTCGCGGC GCCTGGCTGG AGATGCTGGA TGCGCCGGAT
CTGGGGCGCA GCTTTCTTGG CGGCGGAGTC ACCTTCTGCA CCCTCCTGCC CATGCGCGCG
GTGCCCTACC CGCTGGTCTG CCTGCTCGGT ATGAACGAGG GCGATTACCC GCGGCGCAGC
CCCCGTCCGG ACTTCGATCT CATGGCGCTA CCCGGCATGG CCCGCCCCGG CGACCGCTCC
CGCCGCGATG ACGACCGTTA TCTGATGCTG GAGGCCCTCC TGGCCGCCCG TCGGGAACTC
TACGTCAGTT GGGCGGGAAG GGATCAGCGC AATAACCATG AACGGGCGCC CTCCCTGCTG
GTGGCGCAGT TGCGGGAGGC CATTCGCGAC GGCTGGCCGC CGGCCCTGGA AAAGCGCACT
TTCGAGCATC CCCTGCAACC CTTCAGCCCC GACTATCTGG CCGGCAAACC CGGCCTGCGC
ACCTGGGCTC GCGAGTGGTA TCCCTCTCCG CACAGCGCCC CGGAAAACGC CGCGCTACCC
GACCCCGCCG AGATCACCCC CCGCAGCATC CGCGAGCTGC TGGAGTTTTT TCGCCTGCCC
GCTCGTGCCT TTTACCGGCA ACGCCTGCGC ACGGACTTCA ACGAAGAAGA TCCGGCTGAG
GAGGACGACG AACCCTTCAC GCTGGACAGC CTTGAGACCT ATCATCTGCT TGAAGACCTG
CTCCGCGCCG CGGAAAAAAA CGGCCCTGAC CGGATTGCCG AAAGGGTGCG GGCACAACGG
CGCAGTGGTC GCTATCCCCT CGCGGGCATG GCGTCGAGGA CCGCGACCGC ACTGCTCGAC
GACGTCACTC CCGTCCTGAC CGTCTGGCGG GAGATCGGCA CGGAATGGAC CGCAGCGCCG
CAACGACGGG TCGTTCACCG TGCCCGCGGC CGGATATTGC TGGAGGACTG GCTGCCCGCC
TTGTACCAAA ACAACGCAGG AGACCTCGCC TTCGTCCAGC TCCGCGCCAG TCGCCTGCTG
AATAAAGACA GCAAAAAACC CGAAGGGGAT AAACTCGCAG CCCTCTGGCT CCAGCAGTTG
CTCGCCAACG CCGTCGGCCT GCGCTGCGGT GGCATCGTGG TGGGCCGGGA TGTGCTTGTC
CGCGCCGCGC CACCGCCACC GGGCGCCATT GCCGCACTGG ACGATCTGCT GGATCTCTGG
CAGGAAGGTC TCTGCGAGCC CCTGCCGGTC ACCCTCAAAA CCGCCCTCGT CAGCCTGCAG
GGCAAAAACC CGGCACCCAT TTACGACGGC AATGACCGCC TGCCCGGAGA AGCCCGGAAA
GATCTCAGCC TGTTCCGCGA TTATCCCGAC TTCGCCACCC TCAGCAGCGC CCGAACCGGG
CCGCAACGAC GCGGCTTTGC AGAATACGCC GCAGCCCTCT ACCGCCCCTT CGCCGGCTGG
CTGGAAACTT TGGAGTGGCA GGCGCATCCA TGA
 
Protein sequence
MNHPEIEPGF IVLHGDRLEW LSDAVLEWLR AHPLRPLEEE IFLVQSNGIA EWLQWTLAAH 
EGICAAVRVA LPGRFLWESY ARVLGTGIVS ARSPLDKAPL TWRLMRLLPE LLAHADFAPL
RHFIGQSQRP DGALERRWQM AAQIADLFDQ YQVYRGDWLA DWTTDQSLLR RGDGERVTLP
ADQRWQPRLW QALRQDLHSR GLDQAPGRAQ VHEQFLAALN AGRPPVTPLP RRVVIFGAAT
LPEQSLTALA ALGRQMQVIL AVPNPCRYHW ADIVSGRELL RRERRRQPPR NGHDLSATAT
EDLHQFGNPL LAAWGRQGRD FLDLLDQFDE TAALQRQMDI PRIDLFSEDQ GDTLLRQLQV
QIRDLEGIRP ETCTALDDND HSVVFHIAHS ALREVQILHD QLLDRFATGK LQPRDVIVMV
PEIGGFAPLI RATFDQYDRE DRRYIPYHIV DLQARDEQPL LLALDWLLRL PEQRCRQSEI
RDLLNCPALR RRFGLELEDL PIVQHWLAGA GWRWGLSAEH RAALGMPHCG SQNSGDFALQ
RLCLGYASGD DSHFSGIEAY GEVGGLDAAL LGPLGQLLEK LAHWQHVLGE SLVPEHWGEA
ARNLLTDFFS ASDDDDEALL QNLEEALRQW QTDCAAADFN EALPLAVFRG AWLEMLDAPD
LGRSFLGGGV TFCTLLPMRA VPYPLVCLLG MNEGDYPRRS PRPDFDLMAL PGMARPGDRS
RRDDDRYLML EALLAARREL YVSWAGRDQR NNHERAPSLL VAQLREAIRD GWPPALEKRT
FEHPLQPFSP DYLAGKPGLR TWAREWYPSP HSAPENAALP DPAEITPRSI RELLEFFRLP
ARAFYRQRLR TDFNEEDPAE EDDEPFTLDS LETYHLLEDL LRAAEKNGPD RIAERVRAQR
RSGRYPLAGM ASRTATALLD DVTPVLTVWR EIGTEWTAAP QRRVVHRARG RILLEDWLPA
LYQNNAGDLA FVQLRASRLL NKDSKKPEGD KLAALWLQQL LANAVGLRCG GIVVGRDVLV
RAAPPPPGAI AALDDLLDLW QEGLCEPLPV TLKTALVSLQ GKNPAPIYDG NDRLPGEARK
DLSLFRDYPD FATLSSARTG PQRRGFAEYA AALYRPFAGW LETLEWQAHP