Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2907 |
Symbol | |
ID | 7135460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 2583581 |
End bp | 2586943 |
Gene Length | 3363 bp |
Protein Length | 1120 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643531259 |
Product | transglutaminase-like domain protein |
Protein accession | YP_002427275 |
Protein GI | 218667395 |
COG category | [E] Amino acid transport and metabolism [S] Function unknown |
COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases [COG4196] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCATCC ATGTCGTACT GCGACACCAG ACCGTGTATG ACTTTGACCG GCTGGTGGAT ATCCACCCCC ATGTGCTGCG CCTGCGCCCT GCGCCCCATT GTCGCACCCC GATCCTGGCC TACTCGCTCC ATGTCGAACC GGCCAGGCAT TTTCTCAACT GGCAACAGGA CCCATTCGGC AACTACCAGG CGCGCCTGGT CTTTCCCGAG CGCGCGCGCT CGCTGAAGGT GGAGGTAGAG GTCATCGCCG ATTTGACCGT GATCGACCCT TTTGATTTCT TTATAGAGCC CGAGGCCGAA CACTGGCCTT TCCCCTATGA TCCCATCCTC CGCAAGGAAC TCGCACCCTA CCTGGAACAG GAAGAGGCCG GCCCGTTGCT ACGGCGTTTT CTGCTCGATA TCCACCGCCA GCGCCAGCGT ACCGTGGATT TTCTCGTGGC CATCAATCAA CGCCTCCAGG GACAGATCGG CTATACCCTG CGAATGGAGG CCGGGGTGCA GACACCGGAG GAGACCCTGA AAAAGGCCAG TGGCTCCTGC CGCGACAGCG CCTGGCTGAT GGTGCAGGTA CTCCGCCACA TGGGGCTCGC GGCTCGCTTC GTGTCCGGCT ATCTGGTGCA ACTGGTGGCC GATCAGGCGC CCCTGGACGG ACCCGCAGGC CCCGCCAGCG ATTTCACTGA TCTCCATGCC TGGGCAGAAG TTTATGTCCC CGGCGCCGGC TGGATCGGTC TCGACCCGAC CTCCGGACTG TTTGCCGGGG AGGGCCACAT CCCGCTGGCC TGTACCCCGC ATTATAAAAG CGCGGCCCCC ATTACCGGCG CCACCGGTGC CTGCGAGGCC GGGTTTCACT TCACCAACAC CGTGACCCGC CTGCTGGAAA CGCCCCGCGT CACCAAGCCG TACACCGACG GGCAATGGGA ACAGATCATG GGCCTGGGCG ATGCGCTGGA TAAGCGTTTA CAGGCCGCCG ACATGCGCCT CACCATGGGC GGCGAACCAA CCTTCGTCGC CGCTGAAGGA GTGGATGCCG CCGAATGGAA TCAGGACGCC CTCGGCATGC ATAAGCGGGA ACGCGCCGAA ACGCTGGTGC GTCGCCTCGG CCAGCGCTTC GCGCCCGGTG CATTGCTGCA CACGGGCGAA GGCAAATGGT ATCCCGGCGA ACCGCTGCCG CGTTGGGCGC TTGGTCTGTA CTGGCGCAAG GATGGTATCC CCCTGTGGCG CGAGCCCCGG CTGCTCGCCG AGCCGCTGCA CGACTACGGC TGGCAGGCCG ATGACATCCA CAGTTTCGCC TGTACCCTGA CCCGCCATCT GCAGCTCGAC AGCAACCGCC TGCTGCCCGC TTACGAGGAC GCCTGGCATA TCCTGCATCA GGAAGGCCGC ACCCCGGTTA ATATCGATCT CAGCACCCAT CGCCTCGACG ACCCGCTGGA ACGCCAGGCG CTGATCGGCA AATTGCAGGC GGGACTCGAT CAGCCGGTGG GCTGGGTACT GCCCCTCGCC TGGGAATGGA AACAGCAGCG CTGGTACTCG GCGCCGTGGA GTTTCCGGAG CGGGCGGCTG GTTCTGCTGC CTGGCGACTC CCCGCTGGGC ATGCGTCTGC CCCTTGACAG CCTGCCCTGG GTGGTCGAAG CCCACAAAAA GTGGCAGCCG GAGACTGACC CCTTCGCGCC CATGCCACCA TTGCCGGATA TCCACGGCGA GATCACCGCG CGCAACAGCC ACGTCCCTGA AGCGCAGCCA TCGTCCAAGA CGGACCGGCG ACTCTGGGAG GAGATCCCCC ATACCGCAGT CACCCTGGAA ATCCGCAAGG GTTGCCTGTA CTGCTTCTTT CCGCCCTTGC AGGTGATGGA ACACTATCTG TACCTGCTCG GCGCGGTCGA ACATAGCGCC ACCGAACTCA ATATGCCGGT GGTCATCGAG GGTTATGCGC CGCCCAGCGA TCCACGGGTG GAGAAGCTGC TCGTCACCCC CGACCCTGGG GTCATCGAGG TCAATATCCA TCCTTCCACG CACTGGCAGG AGATGGTGAA AAAGACCACG GCCCTCTATG ACGACGCCCA CGCCTGCCGA CTGACCGCCG AAAAATTCAT GCTGGATGGG CGCCATACCG GCACCGGCGG CGGCAATCAC CTGACACTCG GCGGCGCCAC CCCCGGCGAC AGTCCCTTTT TGCGCCGCCC CGATCTGCTG CAGAGCCTCG TCACCTACTG GCAGCATCAC CCGGCCCTGT CCTATTTTTT CAGCGGCATG TTTATCGGCC CCACCAGTCA GTCGCCGCGG GTGGATGAGG CGCGCCATGA GGCCCTTTAC GAGCTGGAGA TCGCTTTTGC TCAGGTGCCG CCCGGCATCG TGCCGCAGCC ATGGCTGGTG GACCGTCTCT TCCGCAATCT GCTGGTGGAC ATCACCGGCA ACACCCACCG CGCCGAAATC TGCATCGACA AGCTCTATTC GCCGGTCGGG GCCGCCGGCA GGCAGGGGCT GGTGGAACTG CGAGCCTTCG AGATGCCGCC CCACGCACGC ATGAGCCTCG CGCAGCAACT GCTGGTGCGC AGCCTCTTGC TGCGTTTCTG GGAAACCCCC TATCGTCATG AACTGGTGCG CTGGGGCACC GCCCTCCACG ATCGCTTCAT GTTACCCCAT TATATCTGGG AAGACCTGCG CGAGATTTGC GCGGACCTGC AGGAACACGA TATTCCCTTC CATCTCGACT GGCTGGCGCC CTTCTCCGAG TTTCGCTTTC CACGATACGG TCACATCCGG ATCGGCGAGA TCGACATTGA ACTGCGCGCC GCCATCGAAC CCTGGCACGT TCTCGGCGAA GAGATGACGG ATAGCGGCAC GGCGCGCTAT GTGGACTCAT CGGTCGAACG GCTGCAGGTG CGGGTAACGG GCATGACTCC GGGACGCCAT GTACTCGCCT GCAACGGACG ACGGGTGCCA CTGCAGGCCA CTCGTGCGCA CGATGCGCAG GTAGCCGGGG TACGTTACCG CGCCTGGCAA CCGCCATCCG CGCTGCACCC CACCATTCCG GTGCATACGC CGCTGACTTT TGACCTGATC GACACCTGGA ACGGGCGTAG CGTGGGCGGT TGCAGCTACC ACGTCATGCA TCCCGGCGGG CGCAATCCCG AAGCCTTCCC GGTCAATGCC TGGGAAGCAG AGGCGCGGCG CCAGAGCCGC TTCACCACGA CCGGCCACAG TCAGGGCCCG CATCCGGAGC CAATCCTGCA GGGTCCGGGC GCGAGCCTTT TCGTGCCAAC CGGCAGCGGT GAGCACGCCT GGCTGCCCCC CCATGCGGAA GATCAACCTG ACTATCCCCA TACCCTGGAC CTACGCATGG CGCGGCCCAT GGCCTCAGGC TGA
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Protein sequence | MGIHVVLRHQ TVYDFDRLVD IHPHVLRLRP APHCRTPILA YSLHVEPARH FLNWQQDPFG NYQARLVFPE RARSLKVEVE VIADLTVIDP FDFFIEPEAE HWPFPYDPIL RKELAPYLEQ EEAGPLLRRF LLDIHRQRQR TVDFLVAINQ RLQGQIGYTL RMEAGVQTPE ETLKKASGSC RDSAWLMVQV LRHMGLAARF VSGYLVQLVA DQAPLDGPAG PASDFTDLHA WAEVYVPGAG WIGLDPTSGL FAGEGHIPLA CTPHYKSAAP ITGATGACEA GFHFTNTVTR LLETPRVTKP YTDGQWEQIM GLGDALDKRL QAADMRLTMG GEPTFVAAEG VDAAEWNQDA LGMHKRERAE TLVRRLGQRF APGALLHTGE GKWYPGEPLP RWALGLYWRK DGIPLWREPR LLAEPLHDYG WQADDIHSFA CTLTRHLQLD SNRLLPAYED AWHILHQEGR TPVNIDLSTH RLDDPLERQA LIGKLQAGLD QPVGWVLPLA WEWKQQRWYS APWSFRSGRL VLLPGDSPLG MRLPLDSLPW VVEAHKKWQP ETDPFAPMPP LPDIHGEITA RNSHVPEAQP SSKTDRRLWE EIPHTAVTLE IRKGCLYCFF PPLQVMEHYL YLLGAVEHSA TELNMPVVIE GYAPPSDPRV EKLLVTPDPG VIEVNIHPST HWQEMVKKTT ALYDDAHACR LTAEKFMLDG RHTGTGGGNH LTLGGATPGD SPFLRRPDLL QSLVTYWQHH PALSYFFSGM FIGPTSQSPR VDEARHEALY ELEIAFAQVP PGIVPQPWLV DRLFRNLLVD ITGNTHRAEI CIDKLYSPVG AAGRQGLVEL RAFEMPPHAR MSLAQQLLVR SLLLRFWETP YRHELVRWGT ALHDRFMLPH YIWEDLREIC ADLQEHDIPF HLDWLAPFSE FRFPRYGHIR IGEIDIELRA AIEPWHVLGE EMTDSGTARY VDSSVERLQV RVTGMTPGRH VLACNGRRVP LQATRAHDAQ VAGVRYRAWQ PPSALHPTIP VHTPLTFDLI DTWNGRSVGG CSYHVMHPGG RNPEAFPVNA WEAEARRQSR FTTTGHSQGP HPEPILQGPG ASLFVPTGSG EHAWLPPHAE DQPDYPHTLD LRMARPMASG
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