| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2896 |
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| Symbol | |
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| ID | 7135955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 2572636 |
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| End bp | 2574696 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643531248 |
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| Product | O-antigen polymerase family protein |
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| Protein accession | YP_002427265 |
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| Protein GI | 218666154 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATCCTG CCGTACCCTC ATATCGGGTC GGGCTCTATG CGGCCTTTCC CCTGATCGCC
TATTTTCTTT CCTGGTATTA CAACGGTCAG ATGATCCCGC TGCTGGCAGT CACCAGCATG
GTTTTGATGG TCTGGGGTGC CCTGGTCTGG TGGCCGCGCC TGGGGGAGGG ACTGGCCTGG
CCGCGGGGGT TTTTGCCGAT CTTCATGCTG CTCTGGCTGC TGTGGTTTGG CCTGACCCTG
TTCTGGAGCG GATCGCCTTA CACGAGCTGG TTCTACTTTT GGGTATTGGG TGCTCTGCCG
CTGACATTTC TCATCAGCGT GATGATCCCG GCGCCGGTCG CAGAACGGGC CTGGCCCTGG
TTTTGGCGAG GGATCCTGCT GAGCGCCTGG ATTCTGAGCG GCATGGCGCT CTGGCAGTAT
TACCACTGGA TGGGGCAGGG CGTTGGCCTA TCCGGCTTGC GGCCTTATGG TCCGCTACTG
GATACCAACA GTTTCGCAGC GTGGCTGAAT CTCCTGTTTT TCCCCATTCT TGCCGTTTAC
CTCATCGATG ATGAGAAACG CGGTACGCGC TTTGGGTCGC TTCAGCTAAA CATGGTCGGG
TTATTTTATC TCGCCACGCT TACCGTAATC CTTCTCGCGT TTTTTTCTAC GAACAGTCGG
GGTGGGTTGC TGGCGTGGGT CAGTACGATG CCTTTTGTTT TCTGGGCGTT CGGAAGGCGC
CCGGGCGGCT GGGCGCGTAT GGCTGTGATA ACCGCTGTGG CGTTGATCAG CTTTTCCCTG
CTGGGTTATC CCCAGGGCTA TGACCTTCTG GGACATCTGG CGCCAGGCTT CATTACCCAT
AACCTTTCTA CGGTTGCCCG CGGGTTGATG TGGGTGGCGA CCTGGCATAT GTTTCTCAGC
CATCCTTGGC TGGGTACCGG CCTCGGGTCT TATTTTCTGA ATTATCCTGC CTACCGTCTG
CCCGGCGAAC TGGCGTCGGC GGGTACGTAC GCCCACAATG ATTACCTGGA ATATCTGGCC
GAGGGAGGGC TCATCAATCT GGGCTTTCTC CTCGGCTTTG CCGCGACCCT GATGTACGCC
CTGTACCGTC TGCTTTACCG TGCGGGTAAG GTCTTGCAGG TGCCGGATGA ACGCCGCTTG
CAGGCCCTGG GTCTGGTGCT CGGGGTTTTT GCCGTTACCG GCCATGCCCT GGGGAATTTC
ATTTTCTACA ATCTACCCCT GAGTCTGCTG GCTGGCCTCT TTCTGGCACG TGCCTGGCGG
TTCTACGGTA TCCAGGCCGA GACTATGCCC TTGCTACCAC GGATCGGCAT TAACCATGGA
TTCATCGTGC AAGCGCTCCT GGTGCTGGCG GTGGTGGCGG CTTCCTGGAA TCTGACCGCC
GATGGCGCGA CTTTCGCCCT GCTGAGCGAA AACGGCTGGC TCAACCGGTT GATCAGCAAC
GCGAACCAGC GTGCCGTGTT TCTACTCAAA GCGGCGGATG CGCTGACGCT GGTACGACCG
TTGGCGACCC AACCCCATGT GTATCTGGCC AATACCTATC TCAGCCTCGC AGATCGCGGA
AACCAGACGG ATATTGCCCA ACGCCGTTCC CTGGTAAAAG CGGCGCTCCG TCAATATCGC
CAGAGTCTGG TGGGAATTCC GCAGCAGTCG GGCGTGTGGA ATTCCATCGG CACGCTCTAT
CTGGAGCAGG GTGCCCTGCT CGGCCTGGAC AAGGCGCAGC AGGACCGGTT GGCGTTGCTG
GCCTGGCGTA AAGGCCTGGC GATCAATCCC GAAAGTGTCG GCCTGCGCAA CAAAATCGCC
CAACTGGCCT ATGTGGATCA GGGGCACGTC GGGGAGGGTA TAGCCTTTTT GTCTGCCGGG
TTACGGCGGC CGCTCTTTCC TTACCCGCGC AGTAATCTGC AGATGGAAAT CGCCCTCACC
CAATGGCGGG CAGGTGAAAA ACATGCGACG GAAGCCACCC TGTTGCAATT GTTGCGCGCG
AATCCGGGCT ATACTCCGGC TGTTTCCTGG CTGCAATCCA TTCATCGCCA GACTGCGAAG
GAGGCGGCAA TATCGCACTG A
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| Protein sequence | MNPAVPSYRV GLYAAFPLIA YFLSWYYNGQ MIPLLAVTSM VLMVWGALVW WPRLGEGLAW
PRGFLPIFML LWLLWFGLTL FWSGSPYTSW FYFWVLGALP LTFLISVMIP APVAERAWPW
FWRGILLSAW ILSGMALWQY YHWMGQGVGL SGLRPYGPLL DTNSFAAWLN LLFFPILAVY
LIDDEKRGTR FGSLQLNMVG LFYLATLTVI LLAFFSTNSR GGLLAWVSTM PFVFWAFGRR
PGGWARMAVI TAVALISFSL LGYPQGYDLL GHLAPGFITH NLSTVARGLM WVATWHMFLS
HPWLGTGLGS YFLNYPAYRL PGELASAGTY AHNDYLEYLA EGGLINLGFL LGFAATLMYA
LYRLLYRAGK VLQVPDERRL QALGLVLGVF AVTGHALGNF IFYNLPLSLL AGLFLARAWR
FYGIQAETMP LLPRIGINHG FIVQALLVLA VVAASWNLTA DGATFALLSE NGWLNRLISN
ANQRAVFLLK AADALTLVRP LATQPHVYLA NTYLSLADRG NQTDIAQRRS LVKAALRQYR
QSLVGIPQQS GVWNSIGTLY LEQGALLGLD KAQQDRLALL AWRKGLAINP ESVGLRNKIA
QLAYVDQGHV GEGIAFLSAG LRRPLFPYPR SNLQMEIALT QWRAGEKHAT EATLLQLLRA
NPGYTPAVSW LQSIHRQTAK EAAISH
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