Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2864 |
Symbol | |
ID | 7134179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 2548971 |
End bp | 2550080 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643531217 |
Product | ABC transporter, permease protein, putative |
Protein accession | YP_002427234 |
Protein GI | 218665119 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.141451 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGCAC GGATCTGGGC GTTGGTCATC AAGGAGTTCC TCGCGCTCTT GCGGGACAAG AAAAGCCGTT TCGTGCTCAT CGGCCCACCC CTCATCCAGT TACTGGTCTT CGGCTATGCC GCCACCTTTG ACCTGAGCCA TATCCCCTAT GCCGTCTACA ACCAGGATAC CGGATTCGCC TCCCGGGAAC TGCTGGGGGA TTTTCAAGGC TCTCCGGCTT TTCAGCAGGT GGCGACCATT GAAAACGAGG GGCAGATAGC CCCGCTCATC GATAATGAAA AGGCCTTGCT CGTCTTGCAG ATCGGCCCCC ACTTCACTCG CGACCTGCTG CTGCATCGGC CGGCTCCCGT GCAGGTGATC ATTAATGGCC GCAACTCCAA CACGGCCACT TTGGCCCTGA ATTACGTCAA TACGGTGCTG CTGTCCTTCG ATACCCATTG GGCCGCGGAC CATCATTGGG GCCGGCCGCC GGCGCAACTG GTGGTCCGTT CCTGGTTCAA TCCCAATCTG CTGTCCCGCT GGTTTATTGT GCCGGGCATT GTGGCCCTGC TCATGCTGGT GGTAACGCTC CTGGTGACCG GCCTGTCGGT GGCGCGCGAG CGGGAGCAAG GAACCTTTGA TCAGCTCCTA GTGACTCCCA TGGGTCCGGT GGAGATCCTG GTAGGAAAAG CCCTGCCGGG TTTCATCATC GGCGGCATGG AGGGATTGCT CATCGCTCTG GTGGCGGTAT TCTGGTTTCA GGTGCCTTTT GTGGGCAGCA TACTCGCGCT ACTGGTGGGT ATGGCCCTGT TCCTGCTGGC GGCGGTAGGC ATCGGCCTGA TGATCTCCTC ACTGGCAGTG ACCCAGCAGC AAGGACTGCT GGGCGTGTTC CTCTTTCTGG TACCCGCCAT TATCCTCTCG GGATTCGCCA CCCCTATCGC CAATATGCCG GAACTGGTGC AGGATCTGAC CTATATCAAC CCCATGCGCT ATTTTCTGGT GGTCGTGCGC GGGGTGTTTC TGGAGGGGGA CAATATGCCC ATGCTCTGGT CGCAATACTG GCCCCTGGCG CTTATCGCGA TTTTCTCCAT GAGTGCCGCC GCCTGGCTCT TCCGGCACAG GATGCAATGA
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Protein sequence | MPARIWALVI KEFLALLRDK KSRFVLIGPP LIQLLVFGYA ATFDLSHIPY AVYNQDTGFA SRELLGDFQG SPAFQQVATI ENEGQIAPLI DNEKALLVLQ IGPHFTRDLL LHRPAPVQVI INGRNSNTAT LALNYVNTVL LSFDTHWAAD HHWGRPPAQL VVRSWFNPNL LSRWFIVPGI VALLMLVVTL LVTGLSVARE REQGTFDQLL VTPMGPVEIL VGKALPGFII GGMEGLLIAL VAVFWFQVPF VGSILALLVG MALFLLAAVG IGLMISSLAV TQQQGLLGVF LFLVPAIILS GFATPIANMP ELVQDLTYIN PMRYFLVVVR GVFLEGDNMP MLWSQYWPLA LIAIFSMSAA AWLFRHRMQ
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