Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2853 |
Symbol | trmD |
ID | 7134967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 2538757 |
End bp | 2539500 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643531206 |
Product | tRNA (guanine-N1)-methyltransferase |
Protein accession | YP_002427223 |
Protein GI | 218666832 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.456825 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTTTG ACGTCCTCAC CATCTTCCCT GGGCTGATCC ACGGCTACTT GCAGGAAGGC ATTGTCGGAC GCGCGCTGAG CCGCGGGCTG ATCGAGGTGC ATACCTGGAA CCCTCGGGAT TTCAGTGACA GCGCTTACCG GCGGGTGGAT GACCGCCCCT TCGGCGGTGG GCCGGGTATG CTGATGATGG CTCCACCCTT GCTGGCGGCG ATTGCGGCGG CGCGACAGGC CAACTCCGGG GCGCCGGTGA TTTACTTGTC ACCCCAGGGG CAGCGCCTGC AGCAGCGGGC GGTGCAGGAT TTTGCAGCGG CACCGGGTCT GATTTTGCTG GCAGGTCGTT ATGAAGGTAT TGATGAGCGG GTGCTGGCGG CAGTGGATGC GGAATGGTCC ATCGGCGACT ACGTGCTGGC GGGCGGGGAA TTGCCGGCGC TGGTGCTGAT GGAGGCTGTG GCGCGGCAGT TGCCGGGTCT GCTGGGTCAT GCGGATTCCG CAGCAGAAGA CAGTTTCGCG GCGTCTGGCC TGCTGGATTG CCCGCATTAT ACCCGGCCCG AGGTGGTGGC GGGGGAAGGA GTCCCGGAGG TGCTGCTTTC CGGAGATCAC GCACGTATCC GGCGCTGGCG TCTGCAGCAG TCGTTGGGCC GCACCGCTGA GCGGCGCCCG GATTTGCTGG AGCAGCGAGG GCTGCGGGCA GATGAGCAAA TATTGTTGGA AGAGTATCGC CGTCAGCGCG GCGAAGCGCA GTAA
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Protein sequence | MRFDVLTIFP GLIHGYLQEG IVGRALSRGL IEVHTWNPRD FSDSAYRRVD DRPFGGGPGM LMMAPPLLAA IAAARQANSG APVIYLSPQG QRLQQRAVQD FAAAPGLILL AGRYEGIDER VLAAVDAEWS IGDYVLAGGE LPALVLMEAV ARQLPGLLGH ADSAAEDSFA ASGLLDCPHY TRPEVVAGEG VPEVLLSGDH ARIRRWRLQQ SLGRTAERRP DLLEQRGLRA DEQILLEEYR RQRGEAQ
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