Gene AFE_2845 details

Gene Information

• Locus tag: AFE_2845
• Symbol: ssb-1
• ID: 7135230
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: -
• Start bp: 2529538
• End bp: 2530008
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 643531198
• Product: single-strand binding protein
• Protein accession: YP_002427215
• Protein GI: 218666108
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0629] Single-stranded DNA-binding protein
• TIGRFAM ID: [TIGR00621] single stranded DNA-binding protein (ssb)

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.101348
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGGGAG TGAACAAGGT CATATTGTTG GGGCATCTGG GACGGGACCC GGAGATGCGT 
TATCAGCCCA GTGGCGGCGC CATCGCGAAC TTCAGCATCG CGACTTCCGA GACCTTCAAG 
GACAAGGAAG GCAACAAGCA GGAGCGCACC GAATGGCATC GCGTCGTGCT CTTCGGACGC 
ACTGCGGAAA TCGCCGGCGA ATATCTGCGC AAGGGCAGCA TGGCCTATGT GGAAGGCCGC 
CTGCAGACGC GCAAGTGGAC CGACAAGGAA GGGCAGGAGC GTTACACCAC GGAGATCGTG 
GGAGACCGTC TGCAACTGGT GGGCGCGCGT GGGGGCGGTG GCGGCGGCGC GGCCAGCTTC 
GATGAGGAAG ATCCGTCCCG GCCGAGTGGC GGCAGCAGTG CCGGGGGCGC GCGGAAAAAT 
GAGATGCCGC CCGCGCCGGC GGAGGATTTT GATGATGATA TTCCGTTCTG A 

 

Protein sequence

MAGVNKVILL GHLGRDPEMR YQPSGGAIAN FSIATSETFK DKEGNKQERT EWHRVVLFGR 
TAEIAGEYLR KGSMAYVEGR LQTRKWTDKE GQERYTTEIV GDRLQLVGAR GGGGGGAASF 
DEEDPSRPSG GSSAGGARKN EMPPAPAEDF DDDIPF