| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2788 |
|---|
| Symbol | |
|---|
| ID | 7136119 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | + |
|---|
| Start bp | 2478570 |
|---|
| End bp | 2478923 |
|---|
| Gene Length | 354 bp |
|---|
| Protein Length | 117 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643531141 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002427158 |
|---|
| Protein GI | 218667034 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0393] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGCAG AACAAAAACC TGTCCTCATC CTCACCATCA ACGACTGCCC CGGCATGCGT
GTGGTCCGGG TCATTGGGCC GGTCTACGGC ACGGGTGTCC GATCCCGCAA CATCATCGGC
AATCTTCTCG GTGGTGTCCG CGCCCTCTTT GGCGGCAAGC AGGCGGGCTA TCTCAACATG
ATTGCTCAGA CCCGGGATGA TGCCCTGGAA CAACTGGCCG AGCATGCCCG ATCTCTTGGT
GCCAATGCCG TTTTGGGAAT GCGCTTTGAT TCCGGCGAAT TTGATGCCGG ACAGGGGCAG
GCCATGAATG AGGTCACGGC TTATGGGACG GCGGTGGTGG TGGAAGTGCA ATAA
|
|---|
| Protein sequence | MSAEQKPVLI LTINDCPGMR VVRVIGPVYG TGVRSRNIIG NLLGGVRALF GGKQAGYLNM
IAQTRDDALE QLAEHARSLG ANAVLGMRFD SGEFDAGQGQ AMNEVTAYGT AVVVEVQ
|
|---|
| |