| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2769 |
|---|
| Symbol | |
|---|
| ID | 7135544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | - |
|---|
| Start bp | 2462775 |
|---|
| End bp | 2464097 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643531124 |
|---|
| Product | restriction endonuclease, putative |
|---|
| Protein accession | YP_002427141 |
|---|
| Protein GI | 218666374 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1715] Restriction endonuclease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTCTG CTAGGCTCAA AGGTGACCAT GCGAGTAATC CCGATCTCTA TGCTGCTGAG
CTGCGCCATG ATCGCGTAAT TGCACTCATG CTGAGTTTTC CAAATCAGAT TGTCTTCCGC
CATCCTGTGC CTTCCTTGGC ATCCATGGAA AGATTATGGG TACCGGAGCA GAAGCAGGAG
AGAGTCATCA TCTCCTCACC TTACCCACAA ATGCTACCGC CCTATGGACG GCTTTCGTCC
AGAAATGGGG AAACCAGCCG GGCTGTGGCC CGGTTTGGAC CCGCTCCGTT GTCTGGGCTA
GAGCCGTGGA TTTTGTGGGT AAGGGTATCG CCGTGCCCGA TGCTTGACGT TCGCCCTATA
TGCTCTATAT GTACCATCTC AAACACCAAT GAAAAGGCGA GGAAGCCACC AGTGACAAAT
CGAAGAGCCG AGAGGCCAGG TGGAGAGCAT GCATGGGTAC TTGCAGCCGC TCTCGCCGTT
ATTGCTTTAG TCTTTGCGTG GATAATGATC CCGGCAATCT TTGCCGGAAA CCCGTTCTCT
AACGCCTTAT TACCCTTATT GAAGATGGCA GGGAGCGTTC TTGCAGCTTT TGCAGGCATC
GGTGCACTGA AGCTATATCT GGAGAAAAAG CGATGGCGAG AGCGTCAGAA TGATCCTGTC
CCTTTGAAAA ATCGCAGCTA CCAGCCACAG CGCGCGCCCT ACGCAAGCCG CGTCAAGCCA
GATACAACCT ACTCCCAGCA GAAAGGTCAT ACAGTGCCCC AGCCCAATTC AAGCAGAGCG
GAATGGAGTC TTGAGCTGCT GCGATCACTT GAGTGGAAGC GATTCGAGGA TTTGTGCGAC
GAATATTCCA AGACAAAAGG TATGCGCACC CAGACCACCA GGCTTGGCGC TGATGGCGGA
ATAGATATCC GGATTTACCG TGAAACTGGG GATCCGATGG GCGTGATCCA GTGCAAGGCA
TGGAAAAAAG ATATTGGCGT GAAGCTGATC CGCGAGCTTG CCGGAGTGAT GGCTCATGAG
AAGGTGAAAA ACGGGGTTTT CATCACGACA AGTAGTTTCA CGCCCGATGC CACGGTTTTT
GCTGCTGCAA ACGGGATTAT CCTGCTAGAT GGCAAAGAGT TCCTAAATGC GATAAAAACG
CTGCCCGTGA GTGATCAGGA ACATTTACTG ACCTTTGCCA CCTCCGGTGA CTATACCACC
CCGACCTGCG CTAAATGTGG CGTGAAGATG GTGCTGAAAA ATGGGTATAG CGAGTTTTGG
GGTTGTCCGA ACTATCCACG GTGCCGTGAA ACCATCAGGA TTAGGGGCGG AGGGAGGAAG
TAG
|
|---|
| Protein sequence | MNSARLKGDH ASNPDLYAAE LRHDRVIALM LSFPNQIVFR HPVPSLASME RLWVPEQKQE
RVIISSPYPQ MLPPYGRLSS RNGETSRAVA RFGPAPLSGL EPWILWVRVS PCPMLDVRPI
CSICTISNTN EKARKPPVTN RRAERPGGEH AWVLAAALAV IALVFAWIMI PAIFAGNPFS
NALLPLLKMA GSVLAAFAGI GALKLYLEKK RWRERQNDPV PLKNRSYQPQ RAPYASRVKP
DTTYSQQKGH TVPQPNSSRA EWSLELLRSL EWKRFEDLCD EYSKTKGMRT QTTRLGADGG
IDIRIYRETG DPMGVIQCKA WKKDIGVKLI RELAGVMAHE KVKNGVFITT SSFTPDATVF
AAANGIILLD GKEFLNAIKT LPVSDQEHLL TFATSGDYTT PTCAKCGVKM VLKNGYSEFW
GCPNYPRCRE TIRIRGGGRK
|
|---|
| |