| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2762 |
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| Symbol | |
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| ID | 7134237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 2457560 |
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| End bp | 2459371 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643531117 |
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| Product | TPR domain protein |
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| Protein accession | YP_002427136 |
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| Protein GI | 218665177 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGACTC AGTCCGAAGC AGAAAATGGT GGTGACCGTC CCTGCGGAGC GACGATTAGG
GGGCTGGATT GTCGCCGATG CCGGACAGGA TTGCAAGCCG GAGCCCCAAC GGGTATTGTG
CCCGCTGGCA AAAACGTGGA GAACGAGCGG ATGAGGAGCA GGCTTGGGGG CATCGTGGCG
GGTATTGCAC TGTGCCTTAC CGCCGGAGGT GCGGCCGCCG ATTCCCCATC AGACGGCATG
ACCGGGGAGC AGCTCTACTA TCTGCTGGTG GCTGAGTTCG CCACTGTACA GCGGCAACCG
CAACTGGCCA TTCCCGCTTG GCAGAAAGCC GCCAAACTGG CACCAGAACC CAATGTTCTC
AGGCGGGCAA CGCAGGCTAT CGCCCGGTTT GGCGATTTTC AGGATGCGCT GCAACTCGCC
AGACGCTGGC GGCAGGCCGC CCCGGGAAGC GCCGAAGCGG ATCAGTTCGA AGCCGCGTTG
CTTCTGACCA CAGGCCAGGA CGAGCAGGCC TTGCAATTGC TGCAGGCCAC ACTGGCCCGC
TTCCCGGACG ACCCGAAGGT CACCCTGCAG TTCGCCGAGT TATTGGTGAC CCACGGGCGC
AGCGGTGAGG CGCGGCGATT ACTAAGCGCA TTGGCCGACA AGGACCCGAA ATCCGCAGCC
GCCTATTATG CGCTCGGGCG CATCGATCTT CTTGAAAAAC GACCGGAACA CGCTATCTCC
TGGCTGGAGA AGGCGCTCGG CATCCGTCCT GACTGGCAGG AAGCCGCCAT CAGCCTCGCC
GAAGCCCTGC AGGCCGTTCA AGGCCCGGCA GCCGCCTTGC GCAGCATTCA AAGCTTCACC
GCCAGCCATC CCGAGGCTAC TCTCGCTCGC CAATATCTGG CAGCGCTCTA TCTTCAGATG
GGCGGCCTGA CCCAGGCCTA TCGCCTCTAT CAGGACATGG CGCGGCAGAA CCCCGATGAC
CCCGACATCC TCCTTTCTCT CGGACTCATG GACATCGACC GGAAGGACTG GAAGAGAGCG
GAAAGCGTTT TGCTGCGTGC CCGGAATCTG GCGCCCCAGT CCCCCGTCCC GGTCTACTAT
CTGGGCCGCC TCTACGAGGC ACAGGACCGA TGGGCAGAGG CGCTGCAGTG GTACCAACGC
ATCCATTCGG GCCCCCTCTA CCCTGCAGTC GAACTACGCA GCGCCCGGGT GGAATACCTG
CTGGGTCATC ACGACAAGGC TATCGACAAA CTGCGGGCAC TGGCGGCCGC GCATCCGCAG
GATGCGCAGA TTCCGCTGCT GGAAGCGGGC CTGCTGCAGG ACAGCGGTCA CCTTCCACAG
GCCCTGCAGG TAATCAACGA CGCCTTGCAA CGCATGCCGG AGCAGCCCAG CCTCTGGTAC
GCCCAGGGCG CCATCTATGA GCAACTGAAA GATTATCCGG CCATGGAAAA GGCCATGCGT
ACGGTTATCC ACCTCGCGCC GAACCATGCA CAAGCCTACA ATTTCATTGG CTACAGCCTG
GTGGAGCGGC ACAGCGATCT GGCCGAAGCA CAAAAATTGC TCACCAAGGC CCTGAGTCTG
AGCCCTGACA ATCCCGAGAT CCTCGACAGC GTCGGCTGGC TTTATCATGC GCGGGGTGAC
AATGACCGAG CCCTGGGATA TCTGCAGAGG GCCCATGCGG CATTGCCGGA TGAGGCCGAT
ATCAGCGCAC ACCTCGGAGA AGTCCTCTGG TCGCTGGGAC GCCATGCGGA GGCACGGCAG
GTCTGGCAGC ACGCGCTGCA AAAACACCCA GATGATGCCG CCCTCCAAAG GGCTCTCAAC
CGCCAGCCAT GA
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| Protein sequence | MVTQSEAENG GDRPCGATIR GLDCRRCRTG LQAGAPTGIV PAGKNVENER MRSRLGGIVA
GIALCLTAGG AAADSPSDGM TGEQLYYLLV AEFATVQRQP QLAIPAWQKA AKLAPEPNVL
RRATQAIARF GDFQDALQLA RRWRQAAPGS AEADQFEAAL LLTTGQDEQA LQLLQATLAR
FPDDPKVTLQ FAELLVTHGR SGEARRLLSA LADKDPKSAA AYYALGRIDL LEKRPEHAIS
WLEKALGIRP DWQEAAISLA EALQAVQGPA AALRSIQSFT ASHPEATLAR QYLAALYLQM
GGLTQAYRLY QDMARQNPDD PDILLSLGLM DIDRKDWKRA ESVLLRARNL APQSPVPVYY
LGRLYEAQDR WAEALQWYQR IHSGPLYPAV ELRSARVEYL LGHHDKAIDK LRALAAAHPQ
DAQIPLLEAG LLQDSGHLPQ ALQVINDALQ RMPEQPSLWY AQGAIYEQLK DYPAMEKAMR
TVIHLAPNHA QAYNFIGYSL VERHSDLAEA QKLLTKALSL SPDNPEILDS VGWLYHARGD
NDRALGYLQR AHAALPDEAD ISAHLGEVLW SLGRHAEARQ VWQHALQKHP DDAALQRALN
RQP
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