| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2746 |
|---|
| Symbol | xerC |
|---|
| ID | 7135595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | + |
|---|
| Start bp | 2443328 |
|---|
| End bp | 2444272 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643531101 |
|---|
| Product | tyrosine recombinase XerC |
|---|
| Protein accession | YP_002427120 |
|---|
| Protein GI | 218667286 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGATCG AAACCGCCAT TGCCCAATTC ATCGAAACGC TCCGGCAGGG CGGCAGGGTC
AGCCCGGCCA CGATCAGCGC CTATAGCCGC GATCTGCATG CCTGGGCGCG GTTTGCGCTA
CAGCGCGGGC AGACGGAGAT CGCGCAGATG GATCGCGGCA GCCTGCGCGC CTACCTCCTG
GCGGAGCGCA GCCGCGGAGT GTCCGTTCGC AGCCTGCGCC GACATTTCGC GGCGCTACGC
GCCCTCTATC GCCATCTGCA GCAGGATGCG CCCGAACTGC GCAACCCGGT ATCGGGGCTC
GCCATGCCCA GGGCGGAGCA GCGCCTGCCC GACTGGCTGA CGGTGGATCA GGCCCGCCTG
CTGATGCAAC CCGCCATATC CGACACGGAA GCGGCACCGC AGGATTTCAC CGGGCTGCGG
GATCAACTGA TCCTGGAGCT GCTGTACTCC AGCGCCCTGC GCGTCAGCGA ACTGGCGGGA
CTGAATCTGG GTGATCTGGA CCCTCACGCG GGCACGGTAC GGGTGCTGGG CAAGGGGCGC
AAGGAACGTA TCGTGCCGGT GGGACAGCCC GCCTGGGCTG CGCTCCGCGC CTACCTTGCG
GCGCGACCGG CCGTGGCGGC CAGCGACGAG CCAGCCCTCT TCGTCAACCG GCGCGGCCAG
CGGCTCACGG TACGCAGCAT TCAGGTGCGG GTCAAAAAAC TCGGCGATGC GCGGCTCGGG
CAGCCACTGC ATCCCCATAC CCTACGCCAC AGCGCTGCCA GCCATCTGCT GCAGTCATCC
GGCGACTTAC GCGCGGTGCA GGAATATTTA GGCCATGCGG GTATTGGCAC GACCGCCATC
TACACCCATA TGGATTATCA GCAACTGGCG CAGGTCTACG ACCAGGCGCA CCCACGGTCG
CGACGTGGTG ACCAGGACAT GAAGCACTTT GAGGGAAAAG CATGA
|
|---|
| Protein sequence | MLIETAIAQF IETLRQGGRV SPATISAYSR DLHAWARFAL QRGQTEIAQM DRGSLRAYLL
AERSRGVSVR SLRRHFAALR ALYRHLQQDA PELRNPVSGL AMPRAEQRLP DWLTVDQARL
LMQPAISDTE AAPQDFTGLR DQLILELLYS SALRVSELAG LNLGDLDPHA GTVRVLGKGR
KERIVPVGQP AWAALRAYLA ARPAVAASDE PALFVNRRGQ RLTVRSIQVR VKKLGDARLG
QPLHPHTLRH SAASHLLQSS GDLRAVQEYL GHAGIGTTAI YTHMDYQQLA QVYDQAHPRS
RRGDQDMKHF EGKA
|
|---|
| |