Gene AFE_2740 details

Gene Information

• Locus tag: AFE_2740
• Symbol: typA
• ID: 7135154
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: -
• Start bp: 2438071
• End bp: 2439888
• Gene Length: 1818 bp
• Protein Length: 605 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 643531095
• Product: GTP-binding protein TypA
• Protein accession: YP_002427115
• Protein GI: 218665904
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR00485] translation elongation factor TU; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCTCGTC AAATCCGTAA CATCGCCATC ATCGCCCACG TGGATCACGG CAAGACCACG 
CTGGTGGATC AGCTCCTGCG CCAGTCCGGT ACTTTTGCCG CCCACCAGCA ACTGGAAGAG 
CGGGTGATGG ACAGCAACGA CCTGGAAAAG GAGCGCGGCA TCACCATCAT GGCCAAGAAC 
ACGGCGGTGC AGTGGGGCGA TACCCACATC AACATCGTTG ACACCCCCGG CCATGCCGAT 
TTCGGCGCCG AGGTGGAGCG GGTGCTGGGT ATGGTGGACG GCGTGTTGCT GCTGGTGGAT 
GCCGTCGAAG GCCCCATGCC GCAGACCCGT TTCGTCACCC GCAAAGCGCT GGAACTGGGT 
CTCAAGCCGA TCGTGGTCAT CAACAAGGTG GATCGCCCCG GCGCCCGCGC CGACTATGTC 
ATCAGTGCCA CCCTCGACCT GTTCGACAAA CTGGGTGCGA CAGAAGAGCA ACTGGATTTT 
CCGGTGATCT ATGCCTCCGG TCTGCAGGGC TATGCGGGGG AAGATCCCGA AGTCCGCTCC 
GGTGACATGA AACCCCTCTT CGAAATGATC CTCGATAAGG TGGCGGCCCC GCAAGGGGAT 
CCCGAAGGTC CGTTGCAGAT GCAGATTGCC GATCTGGATT ACTCCAGTTA TGTAGGGCGT 
ATCGCGGTGG GTCGCATCCG TCGCGGTACC ATGCGTCCCG GTCAGGATAT CGTGTTGATT 
CACGGTGTCG ATAAGACCCA GACCAAGGCG CGCATCCTTC AGCTCCTCGG CTTCGACGGT 
CTCAAGCGGG TGCCGTGGGA AAGTGCCACG GTGGGCGACA TCGTTGCGGT GACCGGCATA 
GAAGATCCAT CCATCGGGGC CACCATCGCG GCGCCAGAAG CGCCGGATGC CCTGCCGTGG 
AAACCCATCG ATGAACCCAC CCTGAACATG ACGTTTCAGG TCAATACCAG CCCCTTCGCG 
GGCAGGGAAG GCAAGTTTGT CACCAGTCGC CAGTTGCGCG AGCGCCTGTA CCGCGAGTTG 
CTGACCAATG TCGCCCTGCG GGTGGAAGAT ACGGATAACG CCGATGTGTT CATGGTCTCG 
GGGCGCGGCG AGCTGCACCT GACCATTCTG GTGGAAAACA TGCGCCGCGA GGGCTACGAA 
CTGGCGGTAT CACGGCCCAG GGTGATTCAG CGCCAGGTGG ACGGCGTCTG GGAAGAGCCC 
TATGAAGCGC TGACCATCGA CCTGGAAGAA CAGCATCAGG GCACCATCAT GGAACGCCTG 
GGTATCCGGC GCGGCGAGTT GCAGGACATG ATTCCCGATG GCCGGGGCCG CGTGCGGCTG 
GAGTACCGGA TTCCCGCACG GGGTCTCATC GGTTTCCACA CCGAATTTCT GACGGCCACG 
TCCGGCACCG GAGTCATCAG CCATATTTTT GATAACTACG GCCCGGTGAA GGGCAGCATC 
CCTTCCCGTA ACAACGGCGT ACTGATCTCT GCGGAAGAGG GCGAAGTGGT TGGATTCGCC 
CTGTTTAACC TGCAGGAACG CGGCCGGATG TTTGTGAGCC CCGGCGACAA GGTCTACGAG 
GGCATGGTCA TTGGTATCCA TACCCGCGAC AACGATCTGG TGGTCAACCC GCTCAAGGAA 
AAGAAGCTGA CCAATATGCG GGCATCGGGC TCAGACGAAA ACATCATGCT GACGCCGCCG 
ATCAAGCTGA CGCTGGAGGC GGCGGTGGAG TTCATTGCGG ACGATGAATT GGTAGAGGCG 
ACGCCGCAGT CCATTCGCAT TCGCAAGCGT TATCTGACGG AGAACGAGCG CAAGAAGGCG 
TCGCGCGGTG GCGGATAA 

 

Protein sequence

MARQIRNIAI IAHVDHGKTT LVDQLLRQSG TFAAHQQLEE RVMDSNDLEK ERGITIMAKN 
TAVQWGDTHI NIVDTPGHAD FGAEVERVLG MVDGVLLLVD AVEGPMPQTR FVTRKALELG 
LKPIVVINKV DRPGARADYV ISATLDLFDK LGATEEQLDF PVIYASGLQG YAGEDPEVRS 
GDMKPLFEMI LDKVAAPQGD PEGPLQMQIA DLDYSSYVGR IAVGRIRRGT MRPGQDIVLI 
HGVDKTQTKA RILQLLGFDG LKRVPWESAT VGDIVAVTGI EDPSIGATIA APEAPDALPW 
KPIDEPTLNM TFQVNTSPFA GREGKFVTSR QLRERLYREL LTNVALRVED TDNADVFMVS 
GRGELHLTIL VENMRREGYE LAVSRPRVIQ RQVDGVWEEP YEALTIDLEE QHQGTIMERL 
GIRRGELQDM IPDGRGRVRL EYRIPARGLI GFHTEFLTAT SGTGVISHIF DNYGPVKGSI 
PSRNNGVLIS AEEGEVVGFA LFNLQERGRM FVSPGDKVYE GMVIGIHTRD NDLVVNPLKE 
KKLTNMRASG SDENIMLTPP IKLTLEAAVE FIADDELVEA TPQSIRIRKR YLTENERKKA 
SRGGG