| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2718 |
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| Symbol | nrdD |
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| ID | 7136323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 2421121 |
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| End bp | 2422896 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643531074 |
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| Product | anaerobic ribonucleoside triphosphate reductase |
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| Protein accession | YP_002427095 |
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| Protein GI | 218667382 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
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| TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.529352 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGATT CTTCGGTGTT GCAGCGAAAC GGCGCAAGGG TACCTTTTGA TCCAAAGCGA
TTGCGCGGGG ATCGCCAGGC GATGGTAGAC GCCATCACTT CCGTGAATGA GTACCTGGAT
CGGGAGGATT GGCGGATCAA CGCCAATGCC AACCAGGGTT ATTCCCTGGG GGGCCTGATC
CTGAACATTG CCGGGAAAGT CACCGCGAAC TACTGGCTGA GCCATGTCTA TCCCGAAAAA
ATCGGTGCCG CCCACCGCGA GGCCGACCTG CATATCCATG ATCTCGACAT GTTGGCCGGT
TATTGTGCCG GATGGTCCCT CCGCACCCTT TTGCAGGAGG GTTTTAACGG CGTACCGGGA
AAGGTGGAGG CGGCACCGCC GCGTCACCTG TCGAGCGCCG TCGGGCAGAT GGTCAACTTC
CTCGGCACCC TGCAGAACGA ATGGGCAGGC GCACAGGCCT TCAGCTCCTT TGATACCTAT
CTGGCGCCGT TCGTCCGCAA GGATGGCTTG TCCTACCGCG AGATTCGCCA AAACATCCAG
GAATTCATCT ATAACCTGAA TGTCCCTTCG CGCTGGGGTG GCCAGACGCC GTTCACGAAT
GTCACCTTCG ATTGGGTTTG CCCTGACGAT CTGAAGGAAC AGGTTCCCGT CATCGGCGGA
GAGGAGATGC CTTTCCGTTA CGGCGATCTG CAGGCCGAAA TGGAACTGAT CAATCAGGCT
TATATCGAGG TCATGAGCGA AGGCGACGCC AGGGGACGGG TTTTTACTTT TCCCATACCC
ACCTACAACA TAACGTCTGA TTTTCCGTGG GATTCGGAGA ATGCCGAAAG GCTGTTCGCC
ATGACTGCCA AATACGGCCT GCCCTACTTT CAGAATTTTA TCAATTCCGA GTTGCAGCCC
AACATGGTGC GCTCCATGTG TTGTCGCCTG CAGCTCGACC TGCGTGAACT GCTCAAACGT
GGGAATGGTC TTTTCGGGTC CTCGGAACAG ACCGGTTCCA TCGGCGTGGT GACCATCAAT
TGTGCCAGGC TGGGCTATCT CCATAAAAAC GATTCGGAAG GTCTTTTCCG TCGCCTGGAC
GCGCTCACGG AAATGGCGAA AGAAAGTCTG GAGATCAAAC GCAAAGTCAT CCAGAGACAA
ATGGACACCG GTCTTTTCCC GTACTCCAAG CGCTATCTGG GTACCTTACG CAACCATTTC
TCCACCATAG GCGTGAATGG GATCCATGAA ATGATCCGCA ACTTCACCGA TGACCGCGAA
AACATCACCA CCCCTGCCGG ATATGCCCTC GCCGTTCGTT TTCTCGACCA TATCAGAGAA
CGCATGGTGG CTTTTCAGGA AGAAACCGGC CACATGTACA ACCTCGAGGC AACCCCTGCG
GAAGGCACCA CCTATCGTTT CGCCAAAGAG GATCGGAAGC GCTTTCCCGA TATTTTACAG
GCAGGTCTCC CGGATAAGCC GTACTACACC AATTCATCAC AACTGCCCGT AGGCTTTACG
GACGACCCTT TCGAGGCCAT GGAACGCCAG GAGGCGTTAC AGGCGAAATA CACCGGCGGA
ACCGTTCTTC ACCTGTATAT GGGGGATCGC GTCTCCAGCA CCGAAGCCTG CAAGCGCCTG
GTGCGCCGCG CACTGGAACG TTTTCGCCTG CCCTACATTA CGGTGACGCC GACCTTTTCC
ATCTGCCCGG TGCACGGATA TCTATCGGGA GAACATCCAT TCTGTCCGAT CTGTGATGAA
GAACGACTTG CTGAAAAACG GCGGCATTCC GCCTGA
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| Protein sequence | MNDSSVLQRN GARVPFDPKR LRGDRQAMVD AITSVNEYLD REDWRINANA NQGYSLGGLI
LNIAGKVTAN YWLSHVYPEK IGAAHREADL HIHDLDMLAG YCAGWSLRTL LQEGFNGVPG
KVEAAPPRHL SSAVGQMVNF LGTLQNEWAG AQAFSSFDTY LAPFVRKDGL SYREIRQNIQ
EFIYNLNVPS RWGGQTPFTN VTFDWVCPDD LKEQVPVIGG EEMPFRYGDL QAEMELINQA
YIEVMSEGDA RGRVFTFPIP TYNITSDFPW DSENAERLFA MTAKYGLPYF QNFINSELQP
NMVRSMCCRL QLDLRELLKR GNGLFGSSEQ TGSIGVVTIN CARLGYLHKN DSEGLFRRLD
ALTEMAKESL EIKRKVIQRQ MDTGLFPYSK RYLGTLRNHF STIGVNGIHE MIRNFTDDRE
NITTPAGYAL AVRFLDHIRE RMVAFQEETG HMYNLEATPA EGTTYRFAKE DRKRFPDILQ
AGLPDKPYYT NSSQLPVGFT DDPFEAMERQ EALQAKYTGG TVLHLYMGDR VSSTEACKRL
VRRALERFRL PYITVTPTFS ICPVHGYLSG EHPFCPICDE ERLAEKRRHS A
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