| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2716 |
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| Symbol | |
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| ID | 7136823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 2418150 |
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| End bp | 2420438 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643531072 |
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| Product | TPR domain/sulfotransferase domain protein |
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| Protein accession | YP_002427093 |
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| Protein GI | 218666205 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF
[COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAAAA AACGCGACCC CTCGGGAAAA GACGCCGCTC ATGTTGCCCT GGAAGCCATA
AAAAGCCACT ATTCCCAACA AAAATACGGT GACGCGATCA CGCTGATCGA ACAGGCAACG
GCCATCCCGG CGGCGGAAAA AATAAACCTC CTCACCACCA TAGGGCAGGC CACGGCCGGA
AGTGCCAGAC TGGACCTGGC CGAACGCGCA TTCAGGGCGG CGCTTGCCGT GGATGGTCAC
CACACGGATA CCCTCAGTAA TCTCGCACTC ATATTGTTTC ATCAAAACAA ATTGGTGGCC
GCCGAAGAAC TTTACCTCGC AGCCATCGCG TCGAAGCCCG ATTTCGTGCC CGCATGGTAT
AACTACGGGC TCCTGCTCCT CGCCTGCCAG CGTTTCCCGG AAGCGGAACG TGCCTTTCGC
GAAGCGCTGG CGCGCAGCCC GGAATGTCTG GATTGCCTCG TCCAGTTGGG CGTCACGCTG
GCGCAGCAGG GCCGGCAGGA AGACGCGCGG GTGTTATTGG ACAAGGCGCT GGACACGGAC
CCCAACCACG CCGTCGCCCT GCATCACAGG AATATGCTCG CGTTGGCCAC CGGCGACCAT
TGCGGCGCCG AAGCCCTGTT CCGGCGGCGG ATGCATCTGT ACGGCGAAAA TCCGTCGCTG
CTGATCGGTC TGGGAATCGC CCTGCAGGAG CAGGGCCGGT TGACCGAAGC GGAAGAAATA
TTCAGAAGAA CCGCCGATAC CTATTCCGTG CATGCGGATG TCGGACATTA TATTTTTCAG
AATCTCGTGG CACAGCAACG CGAACGGGAA GCCGAGGCGT ACATTCGATC CGCCATCGCC
GATCATCCCC AGAGCCATTC TCTCCGCTAT CCTCTGGGTA CCCTGCTGTT CCAGCAGGGT
CGTTATCCCG AAACCCTGGA AGTGCTGCTG CACACGTTAA ACCTGAAGCC TGACCATGTC
GATGCCCTCA TCTTGTCAGG GCGGGCACTG TTTCAATTGA AGTATGTGGA TGAGGCGGTG
GAGACCTTCC ACAGGGCGCT GGAACTTCTG CCGGAGTCTG CGGATGCGCA ATTTCATCTG
AGCGTTGCCC TGATCCACAT GGGAGAATGC CGGACGGCAG AGGGCATGAT CCGCAAGCTG
CTCGAAAACC AGCCGGACAA CGCCGCAGCG CTGGTGAACC TGGCGATCTG CCTGGAGAAA
CTGGGCGAGG TCGAGGCTGC CGAAACGACT CTGCGGAAGG CCGGGAATCT GGCGCCCACC
GACCTTCGGG TGCGGGTCGC CCTTGCCGAG ATACTCCAAC GACAGAAAAA TTACGCGGAA
TCTTTCGCAC TGATAGAACC ACTGTTGTCA TGGGAAAGCG GCGGAGAAGG GGAAAATTAC
GCCGTCAACG CCTGGTTCAT TGCCGGAAAC CACCACCACA GCCATCGGCA ATACGCCAAA
GCGTTCGCCT GTTACCGTCA GGGACATCAG ATGCTGCAAA AGGTCGAACC CTTCGATTTC
CAGGCCATGG CCGACACCCT GCGGAATGAC CTGGACAGGT ATGATCGCTG GAAGGGCCGC
ATGGCGGTGG CGACGCCAAA CGGTCCGACC CCCTTGTTCA TCGTCGGCAT GCCCCGGTCC
GGAACCAGTC TGCTGCATCA GATGTTGGAC ATGCACGCCG ACATCGACGG CCTTGGCGAA
CTCCGGCATC TTCCCCAGGC CGCCGCCAAA CTGCGGAGCC TGCGCCTCGA CTCCGAAAAC
CTGACGGATC ACATCGGCGC AATTCGCCAA TGGTATCTGG ACAGGATCCG GCACCGATGG
ACCGGAAGCC GATACTTTAT CGACAAGCTG CCCACCAATT TTCTGTTTCT GGGCAGCGCA
AAACTCCTGT TCCCGGAAGC AAAAGTCATT TACTGCCGAC GCGATGCGCG CGACAACTGC
CTTTCCATAT TTCAGCAGAA CATGGTCGGG GACCATGCCT ACAGCCACGA CCTCGACAGC
CTGGGAAAAT ACTATCGCGC GCATCTGAAA ACCCTCGCCC AATGGCAATC CCGCATGGCG
GAGGATGTCA TTACCGTAGG CTATGAAGAC ATCGTCGCCG ACCCCGAAAA CGGCATCCGG
GAAATATTGC AATTCCTGAA GTTGGAGTAC GATCCGCGCT GCCTGGATTT TACCGAAAAC
ACCCGGATGC TGCAGACGGC CAGCCGCCTG CAGGTCAAAG AGCCCATCTA CCGTTCGGCC
ATCGGCAAAT GGGAAGCTTA CACCGGACAC CTCGCGCCGC TGCTGACCGC GCTCGGGCAG
GGGGACTGA
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| Protein sequence | MFKKRDPSGK DAAHVALEAI KSHYSQQKYG DAITLIEQAT AIPAAEKINL LTTIGQATAG
SARLDLAERA FRAALAVDGH HTDTLSNLAL ILFHQNKLVA AEELYLAAIA SKPDFVPAWY
NYGLLLLACQ RFPEAERAFR EALARSPECL DCLVQLGVTL AQQGRQEDAR VLLDKALDTD
PNHAVALHHR NMLALATGDH CGAEALFRRR MHLYGENPSL LIGLGIALQE QGRLTEAEEI
FRRTADTYSV HADVGHYIFQ NLVAQQRERE AEAYIRSAIA DHPQSHSLRY PLGTLLFQQG
RYPETLEVLL HTLNLKPDHV DALILSGRAL FQLKYVDEAV ETFHRALELL PESADAQFHL
SVALIHMGEC RTAEGMIRKL LENQPDNAAA LVNLAICLEK LGEVEAAETT LRKAGNLAPT
DLRVRVALAE ILQRQKNYAE SFALIEPLLS WESGGEGENY AVNAWFIAGN HHHSHRQYAK
AFACYRQGHQ MLQKVEPFDF QAMADTLRND LDRYDRWKGR MAVATPNGPT PLFIVGMPRS
GTSLLHQMLD MHADIDGLGE LRHLPQAAAK LRSLRLDSEN LTDHIGAIRQ WYLDRIRHRW
TGSRYFIDKL PTNFLFLGSA KLLFPEAKVI YCRRDARDNC LSIFQQNMVG DHAYSHDLDS
LGKYYRAHLK TLAQWQSRMA EDVITVGYED IVADPENGIR EILQFLKLEY DPRCLDFTEN
TRMLQTASRL QVKEPIYRSA IGKWEAYTGH LAPLLTALGQ GD
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