| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2703 |
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| Symbol | |
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| ID | 7136062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 2407998 |
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| End bp | 2409227 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643531059 |
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| Product | pilus assembly protein CpaE, putative |
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| Protein accession | YP_002427080 |
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| Protein GI | 218666628 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4963] Flp pilus assembly protein, ATPase CpaE |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.711069 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTAG AGCCCGCCGC CCGCTTTGAA CAGGCCACCG GCCCGGTGGT CGTGCTGGCT
CTGTCCCGGC GCCCGGAATG CCTGGCGTGG ATACGGCAGG CCCTCGATGG TCTGGCCACC
GTGCTGCCGG TCAACGCCCG GCAGAACGAA ATCTCCGCCG CCATCGGGCA GAGCGGTGCC
GCTCTGCTGA TCGTGGACTT TGGCGCGGAG AGTGACGATT ACGGCACCGT ATTCGACAGC
CTGCATCAGG CTTTCCCCGA TCTCCGGCTG ATCGGCATAG CGCCGGTGTC CGATCAGCGG
GTGCTGCTGG CGGCCATGCG CGCCCAGTCG GTGGATTTCG TGCAAAGCGG CGGCGCGCCG
GAACCCCTGC GCATGGCGGT GGGCCGCATC CTGTCCCAGA CCCGGCAGCG GCGCGCGCGC
GCCGGCAAGC TGGTGGTGGT GGCGGGCGGT GTCGGCAGCG GCTGCACCAC CCTGGCGTGC
AATCTGGCGG CGTCCCTCTC CGCACTCCAC CCGCAGAGCG CGGAGCTGCT GCTGGATTTC
GGCGCCCCGG TCGGGACCGC CGCCACCTAT ATGGGCATAG CGCCGCGCGT CGCCTTTGCC
GAGGCGGTGC GCAATCTGGA ACGTTGCGAC AAGACGTATC TGGACACGGC CATTGCCCAA
AATACCCGTG GCCTCGGAGT ATTGCCGCTG TTCGCGGCGG CCCGGGATCT GCGCGGACTG
AATCTCAGCG AAGTCTTTCA GATGCTGGCG ATCATCCTGT CGATATATCA TCTGGTGGTG
GCCGATATCG GCGGAGCGGT GTTCAGCGAG GTCAGCCAGT ATCTGCTGCA GGCGGCGGAT
GAGATCGTCG TGGTCTGCGA CCAGTCGGTG GCGGGCATTC TCGAAGGGAA AAAAATCGCC
GCCAATCTGC GGGAAAAGAT CGGCACTCGC CTGCAGGCGA GTGTGGTGGT GAATCATTAC
GAGCCTGCGC TGGGTGTCGA TGCGGTGCAT GTGGGAGAGG CGCTGGGGTT GCCCCTGCTC
GGCCAGGGCA TCGTCCCCGA ACGGCGCCTG CCCCTGATTC AGGCGATGAA CGGCGGCGCA
TTGGCGGTCG ATGCCCTTCC GAAGGACGCC TACAGTCGTG CGGTACAGCA ATGTGCCGGG
TTGCTGGCGG GCCGTATCTG GCCGGACAGC AACCCGGAGG GAACCCGTGG AGCGACCGGC
TGGTTGCGCC GGTGGAGGAC GATGGCATGA
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| Protein sequence | MSVEPAARFE QATGPVVVLA LSRRPECLAW IRQALDGLAT VLPVNARQNE ISAAIGQSGA
ALLIVDFGAE SDDYGTVFDS LHQAFPDLRL IGIAPVSDQR VLLAAMRAQS VDFVQSGGAP
EPLRMAVGRI LSQTRQRRAR AGKLVVVAGG VGSGCTTLAC NLAASLSALH PQSAELLLDF
GAPVGTAATY MGIAPRVAFA EAVRNLERCD KTYLDTAIAQ NTRGLGVLPL FAAARDLRGL
NLSEVFQMLA IILSIYHLVV ADIGGAVFSE VSQYLLQAAD EIVVVCDQSV AGILEGKKIA
ANLREKIGTR LQASVVVNHY EPALGVDAVH VGEALGLPLL GQGIVPERRL PLIQAMNGGA
LAVDALPKDA YSRAVQQCAG LLAGRIWPDS NPEGTRGATG WLRRWRTMA
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