Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2701 |
Symbol | tadB |
ID | 7134976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 2405729 |
End bp | 2406670 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643531057 |
Product | tight adherence protein TadB, putative |
Protein accession | YP_002427078 |
Protein GI | 218666085 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4965] Flp pilus assembly protein TadB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.938711 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGCCC TGGGTCTGAT CGTTTCCGCC CTGTTGCTTC TCGGCATCGC GGCGGGCGTC TGGCTCTCCT TCCGGCAGCG GGAGGCGTTT CCGGATGCCC TGCGCGAGCG CCTGCGGGCC TTCGACGCGC ACACGGGCAA AGCGGGGGAT ACGGAATCCG CCCAGGACGA TCTGCTGGAC CATGCCGCCC GGTACAAAAA GGAATCCTTC CTGCTCCAGG CGGAGGAATG GCTGCGGCGG GCGGGGTTGC GGCCCAAATC CTATCTCCCC AAGGCCGCCA TCGTCGGCCT GCTGATCACT CTGTTGCTGG CGCTTCTGGT CAGCGACTGG CTGGCGCTGG CGTTCATCCT CATCTTTTAT CCATTGGCTC TGTGGGGGCA TATCCGCTAC CGGATCGGTT TGCGGCGCAG CGCCGCGATT CTCGCCCTGC CGGGTTTTCT GGATGCGGTG GTGCGCGCCT CGCGGGTGGG CGCCAGTCTG CCCGCCGCGC TCCTGAGCGC CACCAAGGAT GCCCATGGAC CGGTGCGGGA GGTGTTCAAC CAGATCATGC GCCGCCAGCA ATCCGGAACC CCCATCGACC AGGCCATGCT GACGGTGGGC AAACGCTACC AGATGCAGGA ACTGGCGATC ATCGCCACCG TGCTGCGCCT GAACATGCGC TACGGCGGGC GTACCGACGT CGTGCTCGAA CGCATCGCCG ACTGGTTGCG GGGGAGGGTG ATGGCCCAGG CGGAGTTCAA CGCCCTGTCC GCCGAAACCC GGTTGGGGGC GCTCATTCTC AGTCTGATGA TTCCCGGGCT CGCCCTCTAC ATCGTGCTGA TGAACCACAG CTACCTGCAG GGCATGTGGG CGGTATCGAC CGGGCGCATG CTCCTGGTCG CCGGTGGAAC CCTGCTGGTG ACCGGAGTGG TTCTGCTCAA TCGTATGGCC AAGTTGAGGT GA
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Protein sequence | MMALGLIVSA LLLLGIAAGV WLSFRQREAF PDALRERLRA FDAHTGKAGD TESAQDDLLD HAARYKKESF LLQAEEWLRR AGLRPKSYLP KAAIVGLLIT LLLALLVSDW LALAFILIFY PLALWGHIRY RIGLRRSAAI LALPGFLDAV VRASRVGASL PAALLSATKD AHGPVREVFN QIMRRQQSGT PIDQAMLTVG KRYQMQELAI IATVLRLNMR YGGRTDVVLE RIADWLRGRV MAQAEFNALS AETRLGALIL SLMIPGLALY IVLMNHSYLQ GMWAVSTGRM LLVAGGTLLV TGVVLLNRMA KLR
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