Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2692 |
Symbol | |
ID | 7135936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 2395736 |
End bp | 2397133 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643531048 |
Product | type I secretion membrane fusion protein, HlyD family |
Protein accession | YP_002427069 |
Protein GI | 218666271 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGACAGC TCAGCAACAA CCTGCGCGGC AGTCTGGCGG AGGCTCGGGA ACGGAACCGC CAGGCGGCCC TGAAAAAGCT CGAAAACGAG TTTCTGCCGC CATTGCTGGA AATTCAGGAA CGACCGCCGG CACCCTGGCA GCACTGGATA CTCTGGACAC TGCTGGCGCT GCTCTTCGTC GCGTTGCTGT GGTCTTATCT GGGCAAGATC AATATCGTGG CAACGGCGAC CGGGCAGTTC ATCCCCGACG GGCGGGTCAA GGTGGTACAG CCCCTGTCCA CGGCCACCGT CGAACGCATC TATGTGCATG ACGGCGAGAC GGTGCACAAG GGGCAACTTC TGGTGTCGCT CAATCCGGCG ATAACCCAGG CGAATCTGCA GGCCACCCAG CAGGAGCTGG CCTTCCGGAA TCTGCAGCAG GCGCGTATCC ACGCGCAACT GAGCGGGCGA AGCGCCATTG CACCCGCATC GGGCACCAAC CCTGAATACA TACGGATGGA GAAGGCGTTA CAGGCCGCCC AGGAGGCCGA TTATCAAAGC CGTCTGCAGG CGGCGCAGTC GCGTGCAGAC CAGAATGCCA CGGCGCTGAA CTCGGCACGG GCATTGGCCC AGAGTCTGCA GAATCAGGAG GCGCTGTTGC ACCCCCAGGT CGTCGCCGAT GCCTCTCTTG CGCAAAGCGG CGCCATCCCC CGCATGGAGT ACGAAAATGC GCGGCAAAAG GAACTTGGCC TGCAAAGCCG GATCGCCCAG AACCAGGGAG ATATCGCTCG TTATCTGCAA AGGCAGGTGG AATACCGCCA GGACATCGAA GGCATCAAGG CGAACTATCA CGCCACCCTG TTGCATAGTC TCGGAGAAAA TGCCCAGTCG CTGATTTCGT TGCAGGCGCA ACAAACCCAC GCCAGCCATG ATTTATCCCT GCACGAATTA CGCTCGCCGG TGGACGGCAT CGTGCAGGAT CTCGCGGTAC GCAACGTGGG CGAGGTGGTG ACCGCCGCAC AACCGGTCGT CAGTATCGTC CCCAGCGGTA CACCGCTGGT GGTGGAGGCG TATCTGCCCG ATGCCCACAT GGCTTTCGTG CATGTCGGTC AGACAGCGCG GGTAAAAGTC TCCGCCTATC CTTTCGAGCA GTACGGCGCC CTGCAAGGGG TTGTCCAGAA AATCAGCCCC GATGCCGTTT CTCCGAGCGG GTCCGGTAAG GCCCTGACTG GTGAGGGATT ATCCTACCGG GTGCGCATCA CCGTCCCCCA CCCTTATCTG ATGGTACATG GGGTTTCCGT GAAAATGCGT CCGGGCATGA CCGTATCCGC CAACATCAAC ACCGGCAGGC GTCGGATCAT CCAGTTTTTC CTGGGTCCCT TATTCCGCGA CTGGGATGAA GGACTATCGG TTCGATGA
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Protein sequence | MGQLSNNLRG SLAEARERNR QAALKKLENE FLPPLLEIQE RPPAPWQHWI LWTLLALLFV ALLWSYLGKI NIVATATGQF IPDGRVKVVQ PLSTATVERI YVHDGETVHK GQLLVSLNPA ITQANLQATQ QELAFRNLQQ ARIHAQLSGR SAIAPASGTN PEYIRMEKAL QAAQEADYQS RLQAAQSRAD QNATALNSAR ALAQSLQNQE ALLHPQVVAD ASLAQSGAIP RMEYENARQK ELGLQSRIAQ NQGDIARYLQ RQVEYRQDIE GIKANYHATL LHSLGENAQS LISLQAQQTH ASHDLSLHEL RSPVDGIVQD LAVRNVGEVV TAAQPVVSIV PSGTPLVVEA YLPDAHMAFV HVGQTARVKV SAYPFEQYGA LQGVVQKISP DAVSPSGSGK ALTGEGLSYR VRITVPHPYL MVHGVSVKMR PGMTVSANIN TGRRRIIQFF LGPLFRDWDE GLSVR
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