Gene AFE_2667 details

Gene Information

• Locus tag: AFE_2667
• Symbol: hrcA
• ID: 7136764
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: -
• Start bp: 2369649
• End bp: 2370671
• Gene Length: 1023 bp
• Protein Length: 340 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 643531023
• Product: heat-inducible transcription repressor HrcA
• Protein accession: YP_002427044
• Protein GI: 218667895
• COG category: [K] Transcription
• COG ID: [COG1420] Transcriptional regulator of heat shock gene
• TIGRFAM ID: [TIGR00331] heat shock gene repressor HrcA

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATGAAC GTGCCCGTCA CCTGCTCAAA TCCCTCATCG AACAGCATAT CGCCAAAGGT 
GTGCCGGTCG GCAGTCGCCA GTTGGCCCGT GATGCTGGCC TCAACATCAG TCCCGCCACG 
GTACGTAATG TCATGGCGGA CCTGGAGGAC GAGGGCTACC TGATCTCCCC CCACACTTCC 
GCCGGGCGCA TTCCTACCCA TGTCGGCTAT CGTTTTTTTG TCGATGCACT GCTGCGGGTG 
GTGCCGCTGT CGGCGGAATC CAACCGCCTG CTCATCCATC GCATCGGTTT TCGCGCTCCG 
GATGCGGAAC AGGTGCTGCA CGCCGCCACC GGTATCCTTT CTGAACTGAC GCATATGGCG 
GGCTTTGTGC GGGTGCCGCG GCGGGCAACC CGCATTTTGC GGCATGTGGA CTTCATCGCC 
TTGCATGAGC GTGAGGTGTT GGCCATCTTC GTCACCGACA GGGGGGATGT GGAGAACCGC 
CTGATCCGCA CCGAGCAACC CTTCGCGGCG GCGGAGTTGG CTCAGGCGGC CAATTGCTTC 
AATGCCACAT ACGGCGGTCG CCCACTGCAG GATGTCATCC ATAACCTGCA GCGGGATCTG 
CGGCAGTCCC GCCACGAGAT GGATCGCATA CTGCGCAGCG CCATGGAGCT GGGTGAGGAA 
ATGCTGGAGG AAGACCAGCA GCGCATGCTC ATCGAAGGCG AATTCCAATG GCTGGACCTG 
CCGGAACTGG CGGGGAGCGA ACGCCTGCGT GAACTCCTGG CCGCCGTGCG GCAGAAACGG 
GATCTGGTAC ATTTGCTGGA TGAGAGTATG CGCGGTAGTG AAGTGCGCCT CTTTATCGGT 
GAGGAGTCAG GCTACGCGCC GCTCAGTGAT TGCAGCGTGG TGTCGGCGCC TTACAGCGTC 
GACGGGGAGG TGGTGGGAGT GCTGGGGGTG ATCGGACCGA TGCGGATGCC TTACCAGCAG 
ATCATTCCGC TGGTCGACGG CACGGCGCAA CTGCTCGGCC GCGCCCTGTC GCAATCCGGC 
TAG 

 

Protein sequence

MDERARHLLK SLIEQHIAKG VPVGSRQLAR DAGLNISPAT VRNVMADLED EGYLISPHTS 
AGRIPTHVGY RFFVDALLRV VPLSAESNRL LIHRIGFRAP DAEQVLHAAT GILSELTHMA 
GFVRVPRRAT RILRHVDFIA LHEREVLAIF VTDRGDVENR LIRTEQPFAA AELAQAANCF 
NATYGGRPLQ DVIHNLQRDL RQSRHEMDRI LRSAMELGEE MLEEDQQRML IEGEFQWLDL 
PELAGSERLR ELLAAVRQKR DLVHLLDESM RGSEVRLFIG EESGYAPLSD CSVVSAPYSV 
DGEVVGVLGV IGPMRMPYQQ IIPLVDGTAQ LLGRALSQSG