Gene AFE_2660 details

Gene Information

• Locus tag: AFE_2660
• Symbol: dcd
• ID: 7134128
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: -
• Start bp: 2363056
• End bp: 2363622
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 643531016
• Product: deoxycytidine triphosphate deaminase
• Protein accession: YP_002427037
• Protein GI: 218668022
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0717] Deoxycytidine deaminase
• TIGRFAM ID: [TIGR02274] deoxycytidine triphosphate deaminase

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCATCA AATCCGATCG CTGGATCCGT CACATGGCGG AAGAACACGG GATGATCGAA 
CCCTTTTCAC CGCGGCAGGT GCGGCACGTC GAGGGAAATT CCATTATCTC CTACGGCCTG 
TCTTCCTATG GTTACGATAT CCGTTGCGCC GGAGAGTTCA AAGTCTTCAC CAATGTCCGT 
AGCGTGATTG TCGACCCGAA GAATTTCAGT GAACATTCTT TTGTCGATTT TACTGGGGAT 
ACCTGCATTA TCCCACCGAA TTCTTTCGCC CTGGCGCGCA CCTTGGAATA CTTTCGTATC 
CCGCGTAATG TGCTGACCAT TTGTCTGGGT AAATCCACCT ATGCCCGTTG CGGTATCATC 
GTCAATGTCA CGCCTTTTGA GCCGGAGTGG GAAGGCTATG TGACCCTGGA ATTCTCCAAC 
ACGACGCCCT TACCCGCGAA AATCTATGCA AATGAAGGCG TGGCGCAGGT GCTCTTTTTG 
GAGTCGGACG AGGTCTGCGA AGTGTCTTAT GCCGACCGCG GCGGCAAGTA TCAGGGCCAG 
AGTGGCGTAA CCCTGCCGAA GGCTTGA 

 

Protein sequence

MSIKSDRWIR HMAEEHGMIE PFSPRQVRHV EGNSIISYGL SSYGYDIRCA GEFKVFTNVR 
SVIVDPKNFS EHSFVDFTGD TCIIPPNSFA LARTLEYFRI PRNVLTICLG KSTYARCGII 
VNVTPFEPEW EGYVTLEFSN TTPLPAKIYA NEGVAQVLFL ESDEVCEVSY ADRGGKYQGQ 
SGVTLPKA