| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2628 |
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| Symbol | nuoC |
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| ID | 7135259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 2335405 |
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| End bp | 2336013 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643530984 |
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| Product | NADH-quinone oxidoreductase, C subunit |
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| Protein accession | YP_002427006 |
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| Protein GI | 218666570 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
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| TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.972938 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTGACG CACTCGAAAA TCTGCGCCAG CATCTCAGTG ATGAACTGGG CGCGACATTG
CGAACTGCGC ACCTGGATCG CGGCGAACTG ACCGTGGAAT TGTCCCGTGA GGGCTTCCCT
GCGGCATGTC TCCTGCTTCG GGATGATGTG GCCTGCGCCT TTGATTTGCT GGTAGATGTC
TGCGGAGTGG ACTACTCCGC CTATGGCGAA GGGCTTTGGG AGGGGCCGCG CTTTGCCGTG
GTCTATCATC TGCTCTCCCT GAAGCACCGC CAGCGCCTGC GGGTGCGTAT TTTTGCCGAT
GACGATCTGC CCATCGTGCC CTCCGTAGTG GAGGTCTGGG CTGCCGCTAA CTGGTTTGAG
CGTGAGGCCT TTGATCTTTA CGGGATTCTT TTTGATGGCC ACCCCGATTT GCGGCGCATC
CTTACGGACT ACGGCTTTGT CGGCCATCCC TTCCGTAAGG ATTTTCCCCT GGTCGGTACG
GTGGAAATGC GTTACGACGC GGACCAGGGC CGGGTGGTTT ACGAGCCGAC GCGCACCGAG
GAGCGCGTGG TGGTACCACG TATCATCCGT GAAGCAGGGG AGGGTCGCTA CAATGCCCGA
AATCAATAA
|
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| Protein sequence | MTDALENLRQ HLSDELGATL RTAHLDRGEL TVELSREGFP AACLLLRDDV ACAFDLLVDV
CGVDYSAYGE GLWEGPRFAV VYHLLSLKHR QRLRVRIFAD DDLPIVPSVV EVWAAANWFE
REAFDLYGIL FDGHPDLRRI LTDYGFVGHP FRKDFPLVGT VEMRYDADQG RVVYEPTRTE
ERVVVPRIIR EAGEGRYNAR NQ
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