Gene AFE_2588 details

Gene Information

• Locus tag: AFE_2588
• ID: 7136109
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: +
• Start bp: 2300182
• End bp: 2300883
• Gene Length: 702 bp
• Protein Length: 233 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 643530944
• Product: hypothetical protein
• Protein accession: YP_002426968
• Protein GI: 218667166
• COG category: [S] Function unknown
• COG ID: [COG1636] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.573949
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCAAAA AGCCCGCCAC GCCTCTGCAA ACCCCCGATG GCAGCCGACA TATCCTGCTG 
CACTCCTGCT GCGCCCCCTG CGCCGGACCC ATCATGGACG ATATCCGTGC TGCCAGCATC 
GACTTCACCG TCCTGTTCTA CAATCCCAAC ATCCACCCCA TGGCGGAATA CGAACTGCGC 
AAGGAAGAGA ATATCCGTTA CGCGGAAAAG CTCGGCGTAC CCTTCGTGGA CCTGGACTAC 
GACAAGGACC GCTGGTTTGA ACGGGTCAAG GGCCTGGAAT GGGAACCGGA ACGGGGTGCG 
CGTTGCACCG CCTGTTTCGA CATGCGTTTC GAGCGCTCCG CCCTCTATGC CAGAGAACAC 
GGCTTCACGG TCTTTACCAG CACCCTGGGC ATCTCCCGCT GGAAGGACAT GGCCCAGATC 
AACGCCTGCG GCGAACGGGC CGCCGCCCGC CATGGGGGCC TGCAGTACTG GACCTACAAC 
TGGCGCAAGG GCGGCGGCAG TCAGCGCATG ATCGAGATTG CCAAAGAAGA AAGCTTCTAC 
CAGCAGGAAT ATTGCGGCTG CGTCTATTCC CTGCGCGATT CCAACCGCCA CCGCATCGCC 
CAGGGCCGCT CCAAGATCGT CCGCGGCGTC AAGTTTTACG GACGGGACGA AACGGCCGGC 
GCGGTACCCC CAGAGGCCGC CACCGACATC AGCAAGCGGT AA 

 

Protein sequence

MSKKPATPLQ TPDGSRHILL HSCCAPCAGP IMDDIRAASI DFTVLFYNPN IHPMAEYELR 
KEENIRYAEK LGVPFVDLDY DKDRWFERVK GLEWEPERGA RCTACFDMRF ERSALYAREH 
GFTVFTSTLG ISRWKDMAQI NACGERAAAR HGGLQYWTYN WRKGGGSQRM IEIAKEESFY 
QQEYCGCVYS LRDSNRHRIA QGRSKIVRGV KFYGRDETAG AVPPEAATDI SKR