| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2583 |
|---|
| Symbol | |
|---|
| ID | 7134812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | - |
|---|
| Start bp | 2296703 |
|---|
| End bp | 2297611 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643530940 |
|---|
| Product | alpha-L-glutamate ligase, RimK family |
|---|
| Protein accession | YP_002426964 |
|---|
| Protein GI | 218666801 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
|---|
| TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.549073 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGCGG TGCCCCGCGT AGCCATTCTT TCGCGCCATG CGGAGCTCTA TTCGACCCGC
CGCTTGCTGG CTGCGGTTGT CGCTGCGGGC GCCGAACCGG TCCTGCTTCA GCCTGAACAG
TGTTTGCTGA TGCTCCATGA CACGCAGGCC GCGCTTTATT ATGGATCCTC TCCTCTGGCA
CCCTGTGCGG CGGTGGTTCC GCGGGTGGGC ACTCCAATCA CGCGCCTGGG AGCACGTCTG
CTGCGTTATT TTGCCGGGGA GGGAAGTTGC TGCCTCAATA GTGCAGAGGC GTTAGAGCTT
TCCCGGGATA AATTTGCCTC CCTTCAGGTC CTGGCGGCGG CGGGCGTTGC CGTACCGCAA
ACCGCCTACT TCACCCAGGC GGGGCAGCGC GATCTGGCGG TTTCCTTCTT GGGAATGCCG
CTGGTCCATA AATTACTCAG CGGCTCGCAG GGGGTGGGTG TCAGTCTGGC AGATACACCT
GCCGCTGCGC GGGGCATGCT GGATACCGTC CTCCATCTGC AGCACGAGGC GATGGCGCAG
CGCTTTCTCA GCGGGCGCCA GGATATCCGC GTGATCGTAC TGTTCGGCAG GGTCATTGCG
GCCATGCGCA GGGAGGCATC TGCCGAGGAT TTTCGCAGCA ATTTGCATTG CGGGGGGCGG
GCGTCGGCAT TGCCCGATCT GCCCGAAGAT TTCGCCATCA TTGCCCGCCG GTCGGCGGCT
GCCCTGGGCC TGGGCTTCGC CGGAGTAGAT ATCATGCTGG CCGAAGATCA GCGGCCTCTG
GTGCTGGAGG TGAACCCCGT CCCCAGCCTG GAAGGCATCG AAGCGGTTAC GGGGCAGGAT
ATCGCGGGTA CGCTGGTCAA AGCGCTTTTG CGGCAGGCCT CGTCCCCATC TCCGCAATTG
CAGCCGTAA
|
|---|
| Protein sequence | MVAVPRVAIL SRHAELYSTR RLLAAVVAAG AEPVLLQPEQ CLLMLHDTQA ALYYGSSPLA
PCAAVVPRVG TPITRLGARL LRYFAGEGSC CLNSAEALEL SRDKFASLQV LAAAGVAVPQ
TAYFTQAGQR DLAVSFLGMP LVHKLLSGSQ GVGVSLADTP AAARGMLDTV LHLQHEAMAQ
RFLSGRQDIR VIVLFGRVIA AMRREASAED FRSNLHCGGR ASALPDLPED FAIIARRSAA
ALGLGFAGVD IMLAEDQRPL VLEVNPVPSL EGIEAVTGQD IAGTLVKALL RQASSPSPQL
QP
|
|---|
| |