Gene AFE_2556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_2556 
Symbol 
ID7134182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp2273192 
End bp2273662 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content53% 
IMG OID643530912 
Producthypothetical protein 
Protein accessionYP_002426936 
Protein GI218666605 
COG category[S] Function unknown 
COG ID[COG2210] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0177725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGAGA AAAAGTTGGC AATTATCGCT ACGAAGGGCA CCCTGGATTG GGGTTATCCG 
CCCTTCATCC TGGCATCTAC CGCAGCGGCG CTCGGCTATG GGGTTGAAAT ATTTTTCACC
TTCTACGGCC TGCAGTTGTT GAAGAAGGAT TTGAGCCATC TGCGCGTGAG TCCGCTCGGG
AATCCCGCAA TGCCCATGCC GATACCGATG CCGACACTGA TGATGGTGCT CCCCGGCATG
GAAGGGATGG CTACCTCCAT GATGAAGAGC AAAATGAAGG CAAAGGGTGT AGCCAGTCTG
GAAGAACTTC GTGAGCTCTG TGTCGAAGCA GAAGTACGGA TGATCGCCTG CCAGATGACC
GTTGATCTTT TCGAGTTTGA CACCGCGGAT TTCATTGACG GCATTGAACT CGGTGGTGCT
GCCTCGTTCT TTGAGTTCGC CGGAGAGTCA GATATTACGC TCTTCATGTG A
 
Protein sequence
MDEKKLAIIA TKGTLDWGYP PFILASTAAA LGYGVEIFFT FYGLQLLKKD LSHLRVSPLG 
NPAMPMPIPM PTLMMVLPGM EGMATSMMKS KMKAKGVASL EELRELCVEA EVRMIACQMT
VDLFEFDTAD FIDGIELGGA ASFFEFAGES DITLFM