Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2520 |
Symbol | |
ID | 7135791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 2240538 |
End bp | 2241635 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643530876 |
Product | NLP/P60 family protein |
Protein accession | YP_002426900 |
Protein GI | 218667299 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.509627 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAAAA AACATCACTG GCAGGTTGCC ATGACGGTAA TGACGCTTTT AGGCGGGATC GGTGTGTGTC AGGCGGCCCC GCACGGGGTG GTTCACAAGC CTTTGCATCG GGTCAGTCAC CACTCTATCC ACAAGCCTTT GCACCGGGTC AGTCACCACT ATATCCACAC ACCCTTGCAT AGGGTCGCCC ACCATGCTTA CACGCGCTCC CACCACAAAG CGACACATGC CCTAAAAAGT GACTACACCT CGCTGACGCC GACGGCGTTA CGGTTGCTGC ATCTTGCCCC CGTTGAATTT GCTGGAGTCG GTGCGGCGCC GCAGGCCGTT CCGACCTACG GTTTCCCTAT GCAGTCCTTT CCGGTAGTGG ATAGAGATAA CGTAACAAGC CCCATTTTTG TTGACCAGTC GCTGGGACTA GTCAAGGCCG GGATGGTGAC GGATGAGGCG CCAGTGGTTC TTCCGAAACG GCCGGTGGCC GCTCCGGTTG ATCCGGTGCC CGGGACCCCG CTGCCGGAGC AATCGCATCT GCGGCTGGCG TTGGAGATGC TGGCGAGTCA GGCCTATCAC TGGACCCGCC ACCCTTTGCA GGCACTGGAA AGCAGTGGAA ATATCGCTGT CGGGTCGCAA GCGGCTACCC AACTGGCGGA TGATATCGCG CAGGAAGGGG AATATGCGGA TTCGGATGGC CATTCTGCCA CAGGCTCCTG GTTGTCCCCT CGTCAGATGG TGGTGTCTGC GCTCAAATTC ATCGGTGCTC CCTATCGCTG GGGCGGGATG AGCCCGGTCT CGGGGTTCGA CTGCAGTGGT TTCGTCAAAT ACATCCTGGC GAAGTTTGAT ATTCATGTGC CGCGTACGTC TTATGCCCAG GCCGCCCAGT TGCGGAGGGT TTCCCGGGAT GATCTAAAGC CGGGCGACCT GGTGTTTTTT GACACTCTGC ACCGGCCTTT TTCCCATGTC GGGATATATA TCGGTGACCA GCACTTCGTC AGCGCCCAGA CCCCGAGCAC GGGAGTTCGC GTAGCGAGTT TGAATGACCC TTATTGGGCC GCACGTTTTG ACGGGGCGCG CCGTCTGCCG GTGTCCAGCG CTTCCTGA
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Protein sequence | MQKKHHWQVA MTVMTLLGGI GVCQAAPHGV VHKPLHRVSH HSIHKPLHRV SHHYIHTPLH RVAHHAYTRS HHKATHALKS DYTSLTPTAL RLLHLAPVEF AGVGAAPQAV PTYGFPMQSF PVVDRDNVTS PIFVDQSLGL VKAGMVTDEA PVVLPKRPVA APVDPVPGTP LPEQSHLRLA LEMLASQAYH WTRHPLQALE SSGNIAVGSQ AATQLADDIA QEGEYADSDG HSATGSWLSP RQMVVSALKF IGAPYRWGGM SPVSGFDCSG FVKYILAKFD IHVPRTSYAQ AAQLRRVSRD DLKPGDLVFF DTLHRPFSHV GIYIGDQHFV SAQTPSTGVR VASLNDPYWA ARFDGARRLP VSSAS
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