Gene AFE_2520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_2520 
Symbol 
ID7135791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp2240538 
End bp2241635 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content59% 
IMG OID643530876 
ProductNLP/P60 family protein 
Protein accessionYP_002426900 
Protein GI218667299 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.509627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAA AACATCACTG GCAGGTTGCC ATGACGGTAA TGACGCTTTT AGGCGGGATC 
GGTGTGTGTC AGGCGGCCCC GCACGGGGTG GTTCACAAGC CTTTGCATCG GGTCAGTCAC
CACTCTATCC ACAAGCCTTT GCACCGGGTC AGTCACCACT ATATCCACAC ACCCTTGCAT
AGGGTCGCCC ACCATGCTTA CACGCGCTCC CACCACAAAG CGACACATGC CCTAAAAAGT
GACTACACCT CGCTGACGCC GACGGCGTTA CGGTTGCTGC ATCTTGCCCC CGTTGAATTT
GCTGGAGTCG GTGCGGCGCC GCAGGCCGTT CCGACCTACG GTTTCCCTAT GCAGTCCTTT
CCGGTAGTGG ATAGAGATAA CGTAACAAGC CCCATTTTTG TTGACCAGTC GCTGGGACTA
GTCAAGGCCG GGATGGTGAC GGATGAGGCG CCAGTGGTTC TTCCGAAACG GCCGGTGGCC
GCTCCGGTTG ATCCGGTGCC CGGGACCCCG CTGCCGGAGC AATCGCATCT GCGGCTGGCG
TTGGAGATGC TGGCGAGTCA GGCCTATCAC TGGACCCGCC ACCCTTTGCA GGCACTGGAA
AGCAGTGGAA ATATCGCTGT CGGGTCGCAA GCGGCTACCC AACTGGCGGA TGATATCGCG
CAGGAAGGGG AATATGCGGA TTCGGATGGC CATTCTGCCA CAGGCTCCTG GTTGTCCCCT
CGTCAGATGG TGGTGTCTGC GCTCAAATTC ATCGGTGCTC CCTATCGCTG GGGCGGGATG
AGCCCGGTCT CGGGGTTCGA CTGCAGTGGT TTCGTCAAAT ACATCCTGGC GAAGTTTGAT
ATTCATGTGC CGCGTACGTC TTATGCCCAG GCCGCCCAGT TGCGGAGGGT TTCCCGGGAT
GATCTAAAGC CGGGCGACCT GGTGTTTTTT GACACTCTGC ACCGGCCTTT TTCCCATGTC
GGGATATATA TCGGTGACCA GCACTTCGTC AGCGCCCAGA CCCCGAGCAC GGGAGTTCGC
GTAGCGAGTT TGAATGACCC TTATTGGGCC GCACGTTTTG ACGGGGCGCG CCGTCTGCCG
GTGTCCAGCG CTTCCTGA
 
Protein sequence
MQKKHHWQVA MTVMTLLGGI GVCQAAPHGV VHKPLHRVSH HSIHKPLHRV SHHYIHTPLH 
RVAHHAYTRS HHKATHALKS DYTSLTPTAL RLLHLAPVEF AGVGAAPQAV PTYGFPMQSF
PVVDRDNVTS PIFVDQSLGL VKAGMVTDEA PVVLPKRPVA APVDPVPGTP LPEQSHLRLA
LEMLASQAYH WTRHPLQALE SSGNIAVGSQ AATQLADDIA QEGEYADSDG HSATGSWLSP
RQMVVSALKF IGAPYRWGGM SPVSGFDCSG FVKYILAKFD IHVPRTSYAQ AAQLRRVSRD
DLKPGDLVFF DTLHRPFSHV GIYIGDQHFV SAQTPSTGVR VASLNDPYWA ARFDGARRLP
VSSAS