Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2482 |
Symbol | cga |
ID | 7135439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 2214225 |
End bp | 2216270 |
Gene Length | 2046 bp |
Protein Length | 681 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643530840 |
Product | glucan 1,4-alpha-glucosidase |
Protein accession | YP_002426864 |
Protein GI | 218665170 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
TIGRFAM ID | [TIGR01535] glucan 1,4-alpha-glucosidase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.40631 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAAC TTCCGTTCGG GCAGCCAGGC CTGCCCAGCA CTTGGGCCAG TGCCCACAAG CAGGCTGTGG GCACTGCCTT GAGTGAACGT TCCCGCGTCT GGTTCACCGT CGCCGACGGT GTGTTAACCG AGGTTTATCA TCCGACGATC GACTGTCCGA ATCAACGCGA TCTTCAGTTC CTGATCACCG ATGGTGGTGA GCTATTTCAC GAAGAGCGAC GCGATCTGGA ACATAGCGTC GAGTGGATCG AAGACGGCAT TCCGGCCTTC CAGATTGTCA GCCGAGATCC GCAAGGCCGC TACCGACTGA TCAAGACGGT CTGCACGGAT CCCGATGCCG ACTGCGTGCT TGAGCGAGTC CACTTCGAGC CTTTGGTGGA AGCAGCCCGA CATTACCGCC TGTATCTGCT GTGGGCGCCC CATCTCGACA ACCAGGGGTC GGATAACCAC GGTCGCGTTG AATATGGCGC CAACGAATGC GACTGGCTCA TCGCCTGGCG CGGGTCTCGA TACGCTGCGG TAACCGCCAC GGTACCCTTC TCACGCATGT CAGCCGGCTA TGTGGGTCAT TCCGACGGCT GGCAGGATAT AAACAGACAC CGGCACCTAG AATGGAACTT CACGACAGCG GGACCGGGCA ATATTGCGCT GACGGCAGAA CTGGAGTTGC CGCCAGACGG TCATTTCATG CTTTGTGTCG GGTTCGGCAA CAGCGAGCGG ACGGCCATCA AGGCTGCAAG CGGCTGCCTG GACCGCAACG GATTCGCGTC GGTTCTCAAT CGCTACATGG AAGGGTGGCG CGCTTATCAG CGCGGATTGC TCGATCTGTC GGCCCAGAGC GGCGACGGCG GGCAGCTTTA CCGGCGTAGC ATCGCGGTGT TGCGTACGCA TATCGACAAG ATTCATCGCG GCGCGGGCGT GGCCTCGTTG TCCATTCCCT GGGGCGAATC GGCATCGGCG GACCAGCCGA TTGGCGGCTA TCACTTGGTC TGGCCGCGCG ATCTCTACCA CCAGGCCATG GGCTTGCTCG CCGCCGGCGA CCGGGAGAGG CCAGCGCAGA TTCTGCATTA TTTGTTCTCT CGACAGCGCG AGGATGGAAG CTTCTTTCAG AATTTCTGGG TGGATGGCAG GCCCTACTGG CAAGGCCTGC AGCTCGACGA AGTCGGCTAT TCGGTGCTGT TGGCCAACCA CCTGCACCAC GAAGGGCTCT TGGACTTCGA CCCGTATCCC GTGGTACAGC GTGCCGCCGA TTTCCTGGTG AACCATGGGC CGGTCACCCC CCAGGACCGC TGGGAGGAGA ACAGAGGTTA CAGTCCCCAT ACCCTGGCGG TAGTGGTTGC CGCGCTGCGC GCTGCGGCAG CGGTGGCCGA TGCGACCGGA AAAGGGGCGC AGGCCGTCAC TTACCGACAG GTGGCGCAAG ACTGGGAACA ACGCATCGAG GATTGGACCT TCACCGATTG CGGTCGATTG CTCTTCGGCC ATCCCGAGCA CTACGAGCGT ATCGCCCTGA TCCCGTCGGT CGACACCGGT GAGCATCTGC CAGAGTGTCG AGTATTTCTG CCAATTCGCA ATCTACCAGC GGAAGCAATG TACAACCAGT CCCAATGTTG CGTGGTAGAC GGCGGTTTCC TGGAGTTGGT ACGCCTGGGT CTGCGCACCG CCGCCGACCT GCACGTTCTC AAGACCCTGC CGGTATGGGA TGCACTGTGC CGACGCGAGA CGCCTTGCGG ACCGGCGTGG TATCGCTACA ACGGGGATGG TTACGGTGAG CACGAGGACG GTTCACCATT CGATGGTACC GGGCGCGGAC GCTTGTGGCC GTTGCTCACC GGCGAGCGCG GACACTATGA AGTTGCCGCC GGACGCGACT CCCGGCCCTA CATCAAGGCG CTGGAGTGCT TTGCCAACGA AAACGGCATG CTGCCCGAGC AAGTGTGGGA TACAGAACCG CGTCTGGGCC ATGGCACGGG TTCGGCCACA CCTCTGGTGT GGGCTCACGC GGAGTATATC CGGCTGCTGG GCGCTTCGAG TCGTAAAGGA ACATGA
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Protein sequence | MSELPFGQPG LPSTWASAHK QAVGTALSER SRVWFTVADG VLTEVYHPTI DCPNQRDLQF LITDGGELFH EERRDLEHSV EWIEDGIPAF QIVSRDPQGR YRLIKTVCTD PDADCVLERV HFEPLVEAAR HYRLYLLWAP HLDNQGSDNH GRVEYGANEC DWLIAWRGSR YAAVTATVPF SRMSAGYVGH SDGWQDINRH RHLEWNFTTA GPGNIALTAE LELPPDGHFM LCVGFGNSER TAIKAASGCL DRNGFASVLN RYMEGWRAYQ RGLLDLSAQS GDGGQLYRRS IAVLRTHIDK IHRGAGVASL SIPWGESASA DQPIGGYHLV WPRDLYHQAM GLLAAGDRER PAQILHYLFS RQREDGSFFQ NFWVDGRPYW QGLQLDEVGY SVLLANHLHH EGLLDFDPYP VVQRAADFLV NHGPVTPQDR WEENRGYSPH TLAVVVAALR AAAAVADATG KGAQAVTYRQ VAQDWEQRIE DWTFTDCGRL LFGHPEHYER IALIPSVDTG EHLPECRVFL PIRNLPAEAM YNQSQCCVVD GGFLELVRLG LRTAADLHVL KTLPVWDALC RRETPCGPAW YRYNGDGYGE HEDGSPFDGT GRGRLWPLLT GERGHYEVAA GRDSRPYIKA LECFANENGM LPEQVWDTEP RLGHGTGSAT PLVWAHAEYI RLLGASSRKG T
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