Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2457 |
Symbol | |
ID | 7134579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 2193131 |
End bp | 2194750 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643530816 |
Product | amino acid permease family protein |
Protein accession | YP_002426840 |
Protein GI | 218666989 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCCGTT TTAAGCCTGT AATACGCAAA AACAAGCTTC GCCGCGAGGG TGGCCTGACG GGATTGCTGT TCGCGTGCGT CGGTGCCTCC ATTGGGTCAG GATGGTTGTT CGGTCCACTG TATACCGCAG AGTTTGCCGG ACCCCTGAGC ATCGGGTCCT GGCTCATCGG CGCGCTGGCG ATTCTGCTCC TCGCCCTGGT TTTTGCCGAA TTGGCGCCGC TGATCCCGCG TGCCGGGGCG GTGGTACATT TGGCGCATGT GGGTAATGGT CCTATCGTTG GGCACCTGTG GAGCTGGATG CTTTTTCTCT CATATGCTGC GATAGCGCCG ATTGAAGTGA CGGCCGTGCT GACGTATGCC AATAACTATC TGCCGGGATT TTTGCAGCCG CACACGGGTT TGTTGAGCGC GCAGGGATTC GGAACGGCCC TGCTGCTGTT GACGATATTC GTTGTTCTCA ATTTTCTGGT GGTGCGCTGG GTGCTCAAAA TCAATAATGC GGCCACAGGG TGGAAACTGG CCATTCCGTT GTTGACGGTG ATTCTATTGA TCTCCATTTC GTGGCATCCG GGTAATTTTG CGGTGCGTGC GGTCAACCAG GTGACTGACC TGCATGGCAT GTTTGCGGCG GTCGCCAGTG GTGGTGTCAT TTTTAGCCTG CTGGGATTCC GGCACGCCAT CGATCTTGCC GGGGAGAGCA AGAATCCGCG CAGGGACGTC CCCATCGCCG TGATCGGTTC CGTGCTTATT GCCTCAGCCA TTTACATCGG TCTGCAGGTG GCTTTTCTAG GTGCCGTCAA CCCGCAGGAT CTGGCGCATG GGGGATGGCA GAACTTGCGT TTTCACGGCA TCAACGGTCC GTTTGCAGCG CTAGCTATTT CGATCGGAAT CGGCTGGTTA GCCGTGCTTC TGTATGTGGA TGCTTTCGTG TCTCCGGCGG GCACCGCGTT GATCTACACG ACCACGGCCG CCCGAGTCAG CTTGGCGACG GCGGAGACGG GAGCCGCACC GCAATGGGTG TCGCGGGTCA ATCGCTTTGG CGTTCCCTGG GTGAGCCTCA TCCTGCTTTA TGTAGTGGGC GCGGTGTTCT TTTTCCCTTT CCCATCCTGG CAGAAAATGG TGGGTTATAT TGCCTCGATG ACCGTACTTT CCTATGTGAT CGGCCCTATC GCGTTACTGC AGTTGCGTCG GGCGCTACCG GAGGGTGACC GACCATTTCG GCTGTGGTGG GCGCCGGCAC TGGCTCCCCT CGCTTTTGTG GTTTCAAACT GGATTGTCTT TTGGTCTGGC CTGCATACCC TGAATTTCAT CTTCAGCACG CTCTCTGGCT TGCTGGCGAT CTATGCGATA ACGGGAATCT GGCGCAAGGG TCGTTGGTCG GAAATGGGCT GGCAGTATAT GTGGTGGGTC ATACCTTATT TCTGCGGCCT CTGGCTCATC AGTTGGATCG GACCCAAAAG TTTGGGGGGT ATCGGCACAC TGACATTTTT CCCCAGTATG GGTGTCGTGG CTGTGCTGAG CGTGTCAATT TTCTATATGG CTATTCATCA AGCCGTTTCT GACCAGCAGA TAAATGCCTA TATGCTACAA TTTGCCCATG GAATTGGGCA TGCGCCGTGA
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Protein sequence | MPRFKPVIRK NKLRREGGLT GLLFACVGAS IGSGWLFGPL YTAEFAGPLS IGSWLIGALA ILLLALVFAE LAPLIPRAGA VVHLAHVGNG PIVGHLWSWM LFLSYAAIAP IEVTAVLTYA NNYLPGFLQP HTGLLSAQGF GTALLLLTIF VVLNFLVVRW VLKINNAATG WKLAIPLLTV ILLISISWHP GNFAVRAVNQ VTDLHGMFAA VASGGVIFSL LGFRHAIDLA GESKNPRRDV PIAVIGSVLI ASAIYIGLQV AFLGAVNPQD LAHGGWQNLR FHGINGPFAA LAISIGIGWL AVLLYVDAFV SPAGTALIYT TTAARVSLAT AETGAAPQWV SRVNRFGVPW VSLILLYVVG AVFFFPFPSW QKMVGYIASM TVLSYVIGPI ALLQLRRALP EGDRPFRLWW APALAPLAFV VSNWIVFWSG LHTLNFIFST LSGLLAIYAI TGIWRKGRWS EMGWQYMWWV IPYFCGLWLI SWIGPKSLGG IGTLTFFPSM GVVAVLSVSI FYMAIHQAVS DQQINAYMLQ FAHGIGHAP
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