Gene AFE_2424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_2424 
Symbol 
ID7135421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand- 
Start bp2169343 
End bp2169969 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content57% 
IMG OID643530786 
Productcation efflux permease, putative 
Protein accessionYP_002426810 
Protein GI218665275 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1230] Co/Zn/Cd efflux system component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAATT GCTGTGAAAA CAAAAGCTGC GAGATAGATG CCATGCGCGA CAGTCACGGA 
CGTGTGCTGT GGATCGTGTT CGCCATCAAT GCTGCCATGT TTTTCGTGGA GGGCTCGGCG 
GGCCTAATCG CCCATTCAAT CTCGCTGCTG GCGGACGCGC TGGACATGCT GGGCGATGCC 
TTGGTGTATG GGCTCAGCCT CTTTGCGCTG GCACGGTCGG CGCGCTGGCA GACAGTTGCT 
GCCCTGGTAA AGGGCGGCGT CATGCTCGCC CTTGGGCTTG GTGTGTTGGG GACGGCAGCC 
TACAAGGCGT TTCACCCCGC CATGCCGGGT ATCGAAACGA TGGGAATCGT CGGTGTGCTG 
GCACTCATCG CAAATCTCGT GTGCTTTTTT CTTCTGTACC GATCCCGTGG CCACAACCTA 
AACATGAGTT CCAGTTGGCT GTGCTCTCGA AACGATTTGA TCGCCAATAT CGGTGTTTTA 
CTAGCCGCCA GCAGCATTTA CCTGCTTGCC TCGCGCTGGC CGGATATCAT CGTCGGTGCC 
CTTATCTCCG GTGTGTTTCT CAGCTCCGCG CTTAACGTCC TGCGGCAATC CTTGAAAGCA 
CTACGTGCGC CCGTTTCATC CCGTTAA
 
Protein sequence
MANCCENKSC EIDAMRDSHG RVLWIVFAIN AAMFFVEGSA GLIAHSISLL ADALDMLGDA 
LVYGLSLFAL ARSARWQTVA ALVKGGVMLA LGLGVLGTAA YKAFHPAMPG IETMGIVGVL 
ALIANLVCFF LLYRSRGHNL NMSSSWLCSR NDLIANIGVL LAASSIYLLA SRWPDIIVGA 
LISGVFLSSA LNVLRQSLKA LRAPVSSR