| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2405 |
|---|
| Symbol | |
|---|
| ID | 7134178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | + |
|---|
| Start bp | 2150798 |
|---|
| End bp | 2151298 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643530766 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002426790 |
|---|
| Protein GI | 218666138 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.116798 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTGAACA GCGCCCTTAT CTGGTACGTG GCGACTGTGG TCTTGGCAAT GATGCCGTCA
TTCGCGAGAT GGAGACCCGG CAGCAGCCCT ACCTCTTCAA ATTGCGTCAA ACGCCTATTG
CAGCGAGCAT TTACCCGCCG CGACTGGATG AACGCCGGAC AAAGCTGGGA AGACCGCAAG
GACAGCATTC AACTTGCCGG GTGGCAGCAG AGCCATCGGG TGGTTATTCT CCGGCGTTTG
CTGAAGCAAA ACCTGATTGC CACCCAGGAA CAGCAGGGCC AACTGGAATT TGCTTTCGTG
GACCGGCGCC AGACCAAAGT CTACGAATAC GCCGTGCTGG TGACGGATCT CACAGAAAGT
ATTCTGGGCA TCGCGCAGCT GTACCGGGAC CGGGCGGATG CGGAGAACGG TTTTGACGAG
CTGAAGAATC AGTGGGGCTG GGCGGGTACA GCACCCGTGA TCTGGCGCGT TGCCGACTCT
CCGCCCGCGC CGTGGGGCTG A
|
|---|
| Protein sequence | MLNSALIWYV ATVVLAMMPS FARWRPGSSP TSSNCVKRLL QRAFTRRDWM NAGQSWEDRK
DSIQLAGWQQ SHRVVILRRL LKQNLIATQE QQGQLEFAFV DRRQTKVYEY AVLVTDLTES
ILGIAQLYRD RADAENGFDE LKNQWGWAGT APVIWRVADS PPAPWG
|
|---|
| |