| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2398 |
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| Symbol | |
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| ID | 7136996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 2145398 |
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| End bp | 2146339 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643530761 |
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| Product | site-specific recombinase, phage integrase family |
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| Protein accession | YP_002426785 |
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| Protein GI | 218665325 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACCTCT CAGAACTGAT TTCTCTCTAC ATCGCCCATA AACGTGCGCT CGGATATCGG
TTTCTAACAG AGGACCACTT GTTGAGATCT TTTTGCCGGG CAGTCGGTGA TAGGCCAATA
GAAACTATCG GTGCAGACGC CGTATCTATT TTTTTAAATG GCAAGGGGTC CGTTACGGCC
TACTGGTACA AGAAATATCA TGTGTTAACC GGATGTTACC GATTCGCATT GGCACGCGGG
ATGGTCACTG CAATCCCGCT GCCTCGCAGT GTACCAAAGC AGGACGGGCC CATATTTGTG
CCTTATATTT ATTCCCACGC AGAGTTGAAA AGACTGATTG ATGTCCTTCC CGCTCTTTGC
GCCGGACGCT CCAGAATCGA CGATTACGTC TTCAAAGCCC TTCTGTTACT GATGTATGGT
GCAGGACTTA GAATCAGTGA AGCGCTATCG CTCCATATCC ATGACGTCGA CCTGCAACAG
ACCATTCTAT ATGTTCGCGA GACGAAGTTT TACAAGACCC GCATAGTCCC ATTAGGCAAG
GATTTAACCC AAATTCTGAA TGAATATATC GCCAAACGGA ATAACCGCTA CTCAGCAGCT
ACAGATGCGC CGTTCTTCTG CTTCCGTGAC GGCACACCAC TGAGTAGATC CGCCGCCCAT
GGTCTGTTTC GGCGCGTACG CGCTAAAGCT GACGTCCTCA AAGAGGGTGG CCCGAGGCAT
CAGCCACGCC TTCACGATCT TCGCCACTCA GCCGCTGTGC ATCGCCTTAT TGCCTGGTAT
CGCTGCGGTG CAGATTTGCG CGATTTGTTG CCCAAGTTGG CAACCTATCT TGGGCACGTC
GATCTTTCGG CAACACAACG TTATTTGACC ATGACACCAG AGTTACTTCA CGAGGCGAGC
CTGCGCTTCG CACACTATGC ATTGGAGAAA GACCATGACT GA
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| Protein sequence | MNLSELISLY IAHKRALGYR FLTEDHLLRS FCRAVGDRPI ETIGADAVSI FLNGKGSVTA
YWYKKYHVLT GCYRFALARG MVTAIPLPRS VPKQDGPIFV PYIYSHAELK RLIDVLPALC
AGRSRIDDYV FKALLLLMYG AGLRISEALS LHIHDVDLQQ TILYVRETKF YKTRIVPLGK
DLTQILNEYI AKRNNRYSAA TDAPFFCFRD GTPLSRSAAH GLFRRVRAKA DVLKEGGPRH
QPRLHDLRHS AAVHRLIAWY RCGADLRDLL PKLATYLGHV DLSATQRYLT MTPELLHEAS
LRFAHYALEK DHD
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