| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2375 |
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| Symbol | |
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| ID | 7134936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 2120849 |
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| End bp | 2124013 |
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| Gene Length | 3165 bp |
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| Protein Length | 1054 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643530741 |
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| Product | ATP-dependent helicase, DEAD/DEAH box family |
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| Protein accession | YP_002426765 |
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| Protein GI | 218666117 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1204] Superfamily II helicase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCACT GGCTGCTCGA TGCAATGGCA GAACGACGCA GCCATGCGCT GCGTGAGGCC
GATCGCGTGC AGTTCCATCA GGAAATGGGG CGCGAGGTCC CCGCCTTTGA TGAGGCGCTG
CTGCGCGAGA CGGCGGCCGC GCTGGAAATC GCCGTGCTCG ACCTGAAGGT GGATCGCCTA
GCCGATGAAC CTGAGCAGTT GGCATTGTCG CGCCAGGCGG CGGCGGACGC CTTCCGGCTC
TTGCGCATGT TGCCCTTGCC TGCCGACCCC ATGGTGGCGG GCTCGCACCT GCTGCGCGCA
TCGGTACTGG CCGTGTTGGG TGATCGCGGC GCCGATGCCG CGCGCTGGCT ACGCACACTG
GACGAGGCGG GGCATTGGCC CGCCTTGCCG CTGGAGGCAC GCAACTGGGG CAAACGCTGT
CGGGCCGCCC TTACCGATGT CTGGCTGCGT CTGGTGCGCA AAAGAGGTTG GAGTGACCGC
GATGCGGTGC TTGAGCGCGT GGCGGCGCTG CGTAGCGCGC AGGAGGAGTT CGAGCGCGAT
TACCTGCACA CCTTCGCACC GCTGGAAGCC AAGCGTACTG CGCTTGAGCT GATCGGGATC
TACCACCTGG CCAAGGCAGC GGACGTACTG GCCCACTACA TCACCGACGG TGTAGTGGAC
GGCAGTTTCC AAGTGCAGCC TTTGTTGGAT AGTCACTTCG ACCGAGCCAT CGATGCTTGT
GACGCTGCGC AGCTCGTTGA GTTGGGGCCG ATGACGCGAC TGCTGGCCCG CGCTTCTGCG
CAAATGGTGG ACAACGCTCT GTGGACGGTG ACTCGGAAAG TGAACTCCCG CGTAACCGAC
TTTGTGCGCG AGCTAGTGAA ACGTGGACGC GGCGACCGTG CTTTGTTCGA TGTGCTGCCC
CCGCAACGCC GCACCTTGGC CGAGCGTGGA CTGCTGGGTT CCAGTCGACA GGCTGTGGTG
GTGAGTCTGC CGACCTCCAG CGGCAAGACC CTCATTGCCC AGTTCCGCAT GTTGCAGGCG
CTGAATCAGT TCGAGGATCG CAAAGGCTGG GTGGCCTATC TCGCACCCAG TCGGGCGCTG
GTCAATCAGG TCACGCGGCA ACTGCGCCGT GATTTCCAGC CACTAGGGCT GATGGTGGAG
CGCATCAGCC CGGCCATGGA GATCGACGGC ATCGAGGCCG GCGTGCTGGC GGAGGCGAAC
GACGAGGTGC GTTTCCGAAT CCTCGTGGCT ACGCCCGAGA AGTTCGATTT GATGCTGCGC
CAGGGCTGGG AGGAAAAGAT CGGGCGCCCA CTGACTCTGG TGGTAGTGGA TGAAGCGCAC
ACCATTCAGG ACAAGGTGCG TGGCCTGCGC CTGGAGTTGT TGCTGGCCAC CATCAACCGG
GAGTGCCGAG ACGCGCAATT CCTACTGCTC ACGCCCTTCA TTCAAAATGC ACGCGAGGTG
GCGCGCTGGC TCGGCGGCCA AAATTCGGAG GACATCAGTC TGGGCGTGGA CTGGCAACCC
AACGACCGGG CCATCGGCAT CGTCAGCCCG GTGGACGACG GCCGCAAGAA CGGGCGCAGC
CGTGACTACC GGCTGGATTT CGAAACGGTG CATACCACGC GCCCCAGCAT AGTGCTGGAT
GAAGCCTTTT CGCTGGGCAA GGACGAGACA CTGGCCGGTA CGCTTTCAGA AGCGAGGGAT
GTAGGCGCTT TGGCCGGAAT TACCGCGCGC AAGCTCATGG TGCGGGGGCC TGTTATCGCC
ATGCACAGCC GGCCAGATTA CGTCTGGAAG CTTGCCGAGA GACTTAAATC CGGGCAGGCC
GGGGCTATGT CCGACGATGT GCGCTTCGTG CAGGAATATG TGGCAGCCGA ACTGGGGGCG
CAGTACCCCT TGGTCGATTT GCTCGCCCAT CGCATCGGCA TGCACCACGG CGGTTTGCCT
GAAGAAATCC GTATGCTCAT GGAGTGGTTG TTCGAAAAAG GGCAGCTCGA TGTGCTGGCT
GCAACCACGA CCATTGCTCA GGGTGTGAAC TTCCCTGTCA GCGGGGTGGT GATGGCCGCC
ACGCAATACC CTTATGGGCA AACCATGCCT CCGGAGGATT TCTGGAACAT CGCTGGCCGC
GCCGGTCGTG TGTCTCAGGG GCAACTGGGG GTAGTGGCGT TGGTGGCCAA AGATGAAAGC
GAAGTGGCAC AACGTCGCGA ATTCATCAAC AGCAACACTG GTGATCTGAA TTCCGCCCTG
ATTCAATTGG CGCAGGCTGC ATCTGGTGAG TTGTCTGATC TTGGAAGAAT TGTTTATAGC
CGCCCGGAGT GGTCGAGCTT CTTGCAATAT CTCGTTCACA CCTATCGGCA AATGGGTGCG
CCGTCCAACT TTGCCGATCA GATCGAGCAG GTGCTGCGCG GCACACTGGG CTTCGAGAAG
TTGCGCACCG CTGATAGTCA GCTTGCCCGT CATCTGCTGG ACGGGATTCG AACCTATGTC
GATGACATGG TCCGCCCGCA ACAACCGTTG AAGCTGGTGG ACAGCACTGG CTTTTCATTG
CAGAGCATCA AGACTGTTCT CACGCATAAA GGCGACATCG GGCCGGATTC GTGGAATCGG
GAGCGGCTGT TCCGTGAGGG CGACCGTACC TTGCAGGACA TGATGGGCGT GCTTCTGCGT
GTTCCTGAGC TGCGTGAGAA TTTGGAAACT GTTCTGGGCG GCAGGGCACC GGACGGGGAC
AAGCTCGCGC TCATCCTCAA GGATTGGGTC AATGGTGAGG AAATCACCAC CATCGCCGCC
CGCCATTTCC GCAAAGAGGG TTACGACGAA GTGACAGCAC TCACCAAATG CGGGCAGAAC
CTCTTCGGCA AGCTTGCGCA GACATCTTCC TGGGGCCTGA ACGCACTGCT AGCGATTACC
GCATCTAACC TCTCCGACGA CGAACACACC CGGCTGGCCA ACCTGCCATC GCAGGTGTTT
TACGGGGTGG CCACGGACGA AGCCATCGCC TTGCGTTTGC TTGGAGTGCC GCGCAAGGCG
GCGACGCCAC TGGCCAAGGT GTTGAAACTG GATGCCACGA CGTCTCTGCC GACAATTCGT
CAGCGACTCT CCGCGCTGAC GGAACGGGAC TGGCTTCAGG CCTTGGGGCC GGTCGGTGGC
ACCTATCGTA AGGCTTGGCA GATCATGGAC GGGACACTGG ACTGA
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| Protein sequence | MNHWLLDAMA ERRSHALREA DRVQFHQEMG REVPAFDEAL LRETAAALEI AVLDLKVDRL
ADEPEQLALS RQAAADAFRL LRMLPLPADP MVAGSHLLRA SVLAVLGDRG ADAARWLRTL
DEAGHWPALP LEARNWGKRC RAALTDVWLR LVRKRGWSDR DAVLERVAAL RSAQEEFERD
YLHTFAPLEA KRTALELIGI YHLAKAADVL AHYITDGVVD GSFQVQPLLD SHFDRAIDAC
DAAQLVELGP MTRLLARASA QMVDNALWTV TRKVNSRVTD FVRELVKRGR GDRALFDVLP
PQRRTLAERG LLGSSRQAVV VSLPTSSGKT LIAQFRMLQA LNQFEDRKGW VAYLAPSRAL
VNQVTRQLRR DFQPLGLMVE RISPAMEIDG IEAGVLAEAN DEVRFRILVA TPEKFDLMLR
QGWEEKIGRP LTLVVVDEAH TIQDKVRGLR LELLLATINR ECRDAQFLLL TPFIQNAREV
ARWLGGQNSE DISLGVDWQP NDRAIGIVSP VDDGRKNGRS RDYRLDFETV HTTRPSIVLD
EAFSLGKDET LAGTLSEARD VGALAGITAR KLMVRGPVIA MHSRPDYVWK LAERLKSGQA
GAMSDDVRFV QEYVAAELGA QYPLVDLLAH RIGMHHGGLP EEIRMLMEWL FEKGQLDVLA
ATTTIAQGVN FPVSGVVMAA TQYPYGQTMP PEDFWNIAGR AGRVSQGQLG VVALVAKDES
EVAQRREFIN SNTGDLNSAL IQLAQAASGE LSDLGRIVYS RPEWSSFLQY LVHTYRQMGA
PSNFADQIEQ VLRGTLGFEK LRTADSQLAR HLLDGIRTYV DDMVRPQQPL KLVDSTGFSL
QSIKTVLTHK GDIGPDSWNR ERLFREGDRT LQDMMGVLLR VPELRENLET VLGGRAPDGD
KLALILKDWV NGEEITTIAA RHFRKEGYDE VTALTKCGQN LFGKLAQTSS WGLNALLAIT
ASNLSDDEHT RLANLPSQVF YGVATDEAIA LRLLGVPRKA ATPLAKVLKL DATTSLPTIR
QRLSALTERD WLQALGPVGG TYRKAWQIMD GTLD
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