Gene AFE_2350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_2350 
Symbol 
ID7136067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp2095660 
End bp2096631 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content57% 
IMG OID643530715 
ProductD-alanyl-D-alanine carboxypeptidase, putative 
Protein accessionYP_002426742 
Protein GI218666016 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGCGAG GTGTTCCCAT GCTGGCCTCC ATTCCTGTAC CCGACACAGA TTTTGGACCC 
TCGACGGTAA AATATTTCCC TTCCACAGGG TGGTGGCTCT TTTCCTGGCT TTCGTTAGTG
GCGATTTTTC TATTTTGCAT ACCGCGCGCT GAGGCCGAGA CCAGCGGCCT TCCACCCATA
GATGCGCGTG CCTATATCTT GATGAATGCC GATACCGGCG CGATCATCGC CACCAAAAAT
GCCTATCGGC CCTACGCCAT CGCCAGCATT ACCAAGCTGA TGACGTTGTA TCTGCTCTTC
AAGGATATCG ACAGCGGCCA TCTGCAGTTG AACCAGCACT TTGTGCCCTG CCGGGCGGCG
CTGCAGACGG GGGGGTCCAG CATGTTTATG CATCCTGGCA TGCCTTTTAC CATTGCACAA
CTGATCCTTG GGATGACTGT TCCGTCTGGC AACGACGCCG CCGTGGAGAC GGCGCATCTG
GTAGCTGGCA GCGTACCTGC CTTTGTTGCC GAGATGAACC GGACGGCGCG CAAGATTGGG
ATGCTTTCCA CCACCTTCTA TGATCCCGAT GGGTTGCCAC ATCCCAACAA CATGGCCAGT
CCTTACGATG TGGCCGTCCT CACCCGCACG CTCATGACCC AGTTTCCGCA GTTCATGCCT
TTTTTCAGGC ACGAAAACTT CACCTACGCG GGTATTACCA GTCCCAATCC CAATTTGCTG
GTGGGACGTG TGCCCTTTAT CACCGGCATG AAAAGTGGCT ATACCGACGC TGCGGGGCAT
TGCCTTGTCG CTACGGGCAC GCAGAATGGT ATCAGCCTGA TCGCGGTGAT TCTCGGCGTA
CCATCTTTCC GTGACGAAGG TCGCGGGTTC TGGCGGGCTT CCTGGCAGAG CCTCAAGTTA
CTGGACTGGG GCTTCGCCCG CACCCTGTGG CTGCCTTCGG TACCGCATCT GGAGCGAACC
TCCGCCCGGT GA
 
Protein sequence
MRRGVPMLAS IPVPDTDFGP STVKYFPSTG WWLFSWLSLV AIFLFCIPRA EAETSGLPPI 
DARAYILMNA DTGAIIATKN AYRPYAIASI TKLMTLYLLF KDIDSGHLQL NQHFVPCRAA
LQTGGSSMFM HPGMPFTIAQ LILGMTVPSG NDAAVETAHL VAGSVPAFVA EMNRTARKIG
MLSTTFYDPD GLPHPNNMAS PYDVAVLTRT LMTQFPQFMP FFRHENFTYA GITSPNPNLL
VGRVPFITGM KSGYTDAAGH CLVATGTQNG ISLIAVILGV PSFRDEGRGF WRASWQSLKL
LDWGFARTLW LPSVPHLERT SAR